PDB entry 6uer

View 6uer on RCSB PDB site
Description: crystal form 2: structure of tbp bound to c-c mismatch at ph 7
Deposited on 2019-09-22, released 2020-09-02
The last revision was dated 2020-11-25, with a file datestamp of 2020-11-20.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TATA-box-binding protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: TBP1, At3g13445, MRP15.10
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: TATA-box-binding protein 1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: TBP1, At3g13445, MRP15.10
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DNA (5'-d(*gp*cp*tp*ap*tp*ap*ap*ap*cp*gp*gp*gp*cp*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'D':
    Compound: DNA (5'-d(*tp*gp*cp*cp*cp*cp*tp*tp*tp*ap*tp*ap*gp*c)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'E':
    Compound: DNA (5'-d(*gp*cp*tp*ap*tp*ap*ap*ap*cp*gp*gp*gp*cp*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'F':
    Compound: DNA (5'-d(*tp*gp*cp*cp*cp*cp*tp*tp*tp*ap*tp*ap*gp*c)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6uerA (A:)
msshhhhhhssglvprgshmtdqglegsnpvdlskhpsgivptlqnivstvnldckldlk
aialqarnaeynpkrfaavimrirepkttalifasgkmvctgaksedfskmaarkyariv
qklgfpakfkdfkiqnivgscdvkfpirleglayshaafssyepelfpgliyrmkvpkiv
llifvsgkivitgakmrdetykafeniypvlsefrkiqq

    Sequence, based on observed residues (ATOM records):
    >6uerA (A:)
vdlskhpsgivptlqnivstvnldckldlkaialqarnaeynpkrfaavimrirepktta
lifasgkmvctgaksedfskmaarkyarivqklgfpakfkdfkiqnivgscdvkfpirle
glayshaafssyepelfpgliyrmkvpkivllifvsgkivitgakmrdetykafeniypv
lsefrki

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6uerB (B:)
msshhhhhhssglvprgshmtdqglegsnpvdlskhpsgivptlqnivstvnldckldlk
aialqarnaeynpkrfaavimrirepkttalifasgkmvctgaksedfskmaarkyariv
qklgfpakfkdfkiqnivgscdvkfpirleglayshaafssyepelfpgliyrmkvpkiv
llifvsgkivitgakmrdetykafeniypvlsefrkiqq

    Sequence, based on observed residues (ATOM records):
    >6uerB (B:)
vdlskhpsgivptlqnivstvnldckldlkaialqarnaeynpkrfaavimrirepktta
lifasgkmvctgaksedfskmaarkyarivqklgfpakfkdfkiqnivgscdvkfpirle
glayshaafssyepelfpgliyrmkvpkivllifvsgkivitgakmrdetykafeniypv
lsefrki

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.