PDB entry 6u82

View 6u82 on RCSB PDB site
Description: crystal structure of the double homeodomain of dux4 in complex with a dna aptamer containing bulge and loop
Deposited on 2019-09-04, released 2020-02-19
The last revision was dated 2020-03-18, with a file datestamp of 2020-03-13.
Experiment type: XRAY
Resolution: 3.21 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Double homeobox protein 4
    Species: Homo sapiens [TaxId:9606]
    Gene: DUX4, DUX10
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (38-mer)
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'D':
    Compound: Double homeobox protein 4
    Species: Homo sapiens [TaxId:9606]
    Gene: DUX4, DUX10
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DNA (38-mer)
    Species: HOMO SAPIENS, synthetic [TaxId:9606]

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6u82A (A:)
grgrrrrlvwtpsqsealracfernpypgiatrerlaqaigipeprvqiwfqnersrqlr
qhrresrpwpgrrgppegrrkrtavtgsqtalllrafekdrfpgiaareelaretglpes
riqiwfqnrrarhp

    Sequence, based on observed residues (ATOM records):
    >6u82A (A:)
grrrrlvwtpsqsealracfernpypgiatrerlaqaigipeprvqiwfqnersrqlrqh
rresrpwpgrrgppegrrkrtavtgsqtalllrafekdrfpgiaareelaretglpesri
qiwfqnrrarhp

  • Chain 'B':
    No sequence available.

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6u82D (D:)
grgrrrrlvwtpsqsealracfernpypgiatrerlaqaigipeprvqiwfqnersrqlr
qhrresrpwpgrrgppegrrkrtavtgsqtalllrafekdrfpgiaareelaretglpes
riqiwfqnrrarhp

  • Chain 'E':
    No sequence available.