PDB entry 6u7t

View 6u7t on RCSB PDB site
Description: muty adenine glycosylase bound to dna containing a transition state analog (1n) paired with d(8-oxo-g)
Deposited on 2019-09-03, released 2019-10-02
The last revision was dated 2020-01-29, with a file datestamp of 2020-01-24.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adenine DNA glycosylase
    Species: Geobacillus stearothermophilus [TaxId:1422]
    Gene: mutY
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (5'-d(*ap*ap*gp*ap*cp*(8og)p*tp*gp*gp*ap*c)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'C':
    Compound: DNA (5'-d(p*gp*tp*cp*cp*ap*(nr1)p*gp*tp*cp*t)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: 8OG, NR1, SF4, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6u7tA (A:)
mtreterfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqqtrvetvipyfeq
fidrfptlealadadedevlkaweglgyysrvrnlhaavkevktryggkvpddpdefsrl
kgvgpytvgavlslaygvpepavdgnvmrvlsrlflvtddiakpstrkrfeqivreimay
enpgafnealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvpla
vavladdegrvlirkrdstgllanlwefpscetdgadgkekleqmvgeqyglqveltepi
vsfehafshlvwqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas
gvrppp

    Sequence, based on observed residues (ATOM records):
    >6u7tA (A:)
rfparefqrdlldwfarerrdlpwrkdrdpykvwvsevmlqqtrvetvipyfeqfidrfp
tlealadadedevlkaweglgyysrvrnlhaavkevktryggkvpddpdefsrlkgvgpy
tvgavlslaygvpepavdgnvmrvlsrlflvtddiakpstrkrfeqivreimayenpgaf
nealielgalvctprrpscllcpvqaycqafaegvaeelpvkmkktavkqvplavavlad
degrvlirkrdstgllanlwefpscetdgadgkekleqmvgeqeltepivsfehafshlv
wqltvfpgrlvhggpveepyrlapedelkayafpvshqrvwreykewas

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.