PDB entry 6u7h

View 6u7h on RCSB PDB site
Description: cryo-em structure of the hcov-229e spike glycoprotein
Deposited on 2019-09-02, released 2019-11-13
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: EM
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Spike glycoprotein
    Species: Human coronavirus 229E [TaxId:11137]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U7H
  • Chain 'B':
    Compound: Spike glycoprotein
    Species: Human coronavirus 229E [TaxId:11137]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U7H
  • Chain 'C':
    Compound: Spike glycoprotein
    Species: Human coronavirus 229E [TaxId:11137]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U7H
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6u7hA (A:)
mfvllvayallhiagcqttnglntsysvcngcvgysenvfavesggyipsdfafnnwfll
tntssvvdgvvrsfqplllnclwsvsglrfttgfvyfngtgrgdckgfssdvlsdviryn
lnfeenlrrgtilfktsygvvvfyctnntlvsgdahipfgtvlgnfycfvnttigtetts
afvgalpktvrefvisrtghfyingyryftlgnveavnfnvttaettdfftvalasyadv
lvnvsqtsianiiycnsvinrlrcdqlsfyvpdgfystspiqsvelpvsivslpvyhkhm
fivlyvdfkpqsgggkcfncypagvnitlanfnetkgplcvdtshfttkyvavyanvgrw
sasintgncpfsfgkvnnfvkfgsvcfslkdipggcampivanwayskyytigtlyvsws
dgdgitgvpqpvegvssfmnvtldkctkyniydvsgvgvirvsndtflngitytstsgnl
lgfkdvtkgtiysitpcnppdqlvvyqqavvgamlsenftsygfsnvvelpkffyasngt
ynctdavltyssfgvcadgsiiavqprnvsydsvsaivtanlsipsnwtisvqveylqit
stpivvdcstyvcngnvrcvellkqytsacktiedalrnsarlesadvsemltfdkkaft
lanvssfgdynlssvipslptsgsrvagrsaiedilfskivtsglgtvdadyknctkgls
iadlacaqyyngimvlpgvadaermamytgsliggialggltsavsipfslaiqarlnyv
alqtdvlqenqkilaasfnkamtnivdaftgvndaitqtsqalqtvatalnkiqdvvnqq
gnslnhltsqlrqnfqaisssiqaiydrldppqadqqvdrlitgrlaalnvfvshtltky
tevrasrqlaqqkvnecvksqskrygfcgngthifsivnaapeglvflhtvllptqykdv
eawsglcvdgtngyvlrqpnlalykegnyyritsrimfepriptmadfvqiencnvtfvn
isrselqtivpeyidvnktlqelsyklpnytvpdlvveqynqtilnltseistlenksae
lnytvqklqtlidninstlvdlkwlnrvetyiksggyipeaprdgqayvrkdgewvllst
flnsenlyfqsgshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6u7hA (A:)
envfavesggyipsdfafnnwflltntssvvdgvvrsfqplllnclwsvsglrfttgfvy
fngtgrgdckgfssdvlsdvirynlnfeenlrrgtilfktsygvvvfyctnnlgnfycfv
nttigtettsafvgalpktvrefvisrtghfyingyryftlgnveavnfnvttaettdff
tvalasyadvlvnvsqtsianiiycnsvinrlrcdqlsfyvpdgfystspiqsvelpvsi
vslpvyhkhmfivlyvdfkpqsgggkcfncypagvnitlanfnetkgplcvdtshfttky
vavyanvgrwsasintgncpfsfgkvnnfvkfgsvcfslkdipggcampivanwayskyy
tigtlyvswsdgdgitgvpqpvegvssfmnvtldkctkyniydvsgvgvirvsndtflng
itytstsgnllgfkdvtkgtiysitpcnppdqlvvyqqavvgamlsenftsygfsnvvel
pkffyasngtynctdavltyssfgvcadgsiiavqsaivtanlsipsnwtisvqveylqi
tstpivvdcstyvcngnvrcvellkqytsacktiedalrnsarlesadvsemltfdkkaf
tlanvssfgdynlssvipslptsgsrvagrsaiedilfskivtsglgtvdadyknctkgl
siadlacaqyyngimvlpgvadaermamytgsliggialpfslaiqarlnyvalqtdvlq
enqkilaasfnkamtnivdaftgvndaitqtsqalqtvatalnkiqdvvnqqgnslnhlt
sqlrqnfqaisssiqaiydrldppqadqqvdrlitgrlaalnvfvshtltkytevrasrq
laqqkvnecvksqskrygfcgngthifsivnaapeglvflhtvllptqykdveawsglcv
dgtngyvlrqpnlalykegnyyritsrimfepriptmadfvqiencnvtfvnisrselqt
ivpey

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6u7hB (B:)
mfvllvayallhiagcqttnglntsysvcngcvgysenvfavesggyipsdfafnnwfll
tntssvvdgvvrsfqplllnclwsvsglrfttgfvyfngtgrgdckgfssdvlsdviryn
lnfeenlrrgtilfktsygvvvfyctnntlvsgdahipfgtvlgnfycfvnttigtetts
afvgalpktvrefvisrtghfyingyryftlgnveavnfnvttaettdfftvalasyadv
lvnvsqtsianiiycnsvinrlrcdqlsfyvpdgfystspiqsvelpvsivslpvyhkhm
fivlyvdfkpqsgggkcfncypagvnitlanfnetkgplcvdtshfttkyvavyanvgrw
sasintgncpfsfgkvnnfvkfgsvcfslkdipggcampivanwayskyytigtlyvsws
dgdgitgvpqpvegvssfmnvtldkctkyniydvsgvgvirvsndtflngitytstsgnl
lgfkdvtkgtiysitpcnppdqlvvyqqavvgamlsenftsygfsnvvelpkffyasngt
ynctdavltyssfgvcadgsiiavqprnvsydsvsaivtanlsipsnwtisvqveylqit
stpivvdcstyvcngnvrcvellkqytsacktiedalrnsarlesadvsemltfdkkaft
lanvssfgdynlssvipslptsgsrvagrsaiedilfskivtsglgtvdadyknctkgls
iadlacaqyyngimvlpgvadaermamytgsliggialggltsavsipfslaiqarlnyv
alqtdvlqenqkilaasfnkamtnivdaftgvndaitqtsqalqtvatalnkiqdvvnqq
gnslnhltsqlrqnfqaisssiqaiydrldppqadqqvdrlitgrlaalnvfvshtltky
tevrasrqlaqqkvnecvksqskrygfcgngthifsivnaapeglvflhtvllptqykdv
eawsglcvdgtngyvlrqpnlalykegnyyritsrimfepriptmadfvqiencnvtfvn
isrselqtivpeyidvnktlqelsyklpnytvpdlvveqynqtilnltseistlenksae
lnytvqklqtlidninstlvdlkwlnrvetyiksggyipeaprdgqayvrkdgewvllst
flnsenlyfqsgshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6u7hB (B:)
envfavesggyipsdfafnnwflltntssvvdgvvrsfqplllnclwsvsglrfttgfvy
fngtgrgdckgfssdvlsdvirynlnfeenlrrgtilfktsygvvvfyctnnlgnfycfv
nttigtettsafvgalpktvrefvisrtghfyingyryftlgnveavnfnvttaettdff
tvalasyadvlvnvsqtsianiiycnsvinrlrcdqlsfyvpdgfystspiqsvelpvsi
vslpvyhkhmfivlyvdfkpqsgggkcfncypagvnitlanfnetkgplcvdtshfttky
vavyanvgrwsasintgncpfsfgkvnnfvkfgsvcfslkdipggcampivanwayskyy
tigtlyvswsdgdgitgvpqpvegvssfmnvtldkctkyniydvsgvgvirvsndtflng
itytstsgnllgfkdvtkgtiysitpcnppdqlvvyqqavvgamlsenftsygfsnvvel
pkffyasngtynctdavltyssfgvcadgsiiavqsaivtanlsipsnwtisvqveylqi
tstpivvdcstyvcngnvrcvellkqytsacktiedalrnsarlesadvsemltfdkkaf
tlanvssfgdynlssvipslptsgsrvagrsaiedilfskivtsglgtvdadyknctkgl
siadlacaqyyngimvlpgvadaermamytgsliggialpfslaiqarlnyvalqtdvlq
enqkilaasfnkamtnivdaftgvndaitqtsqalqtvatalnkiqdvvnqqgnslnhlt
sqlrqnfqaisssiqaiydrldppqadqqvdrlitgrlaalnvfvshtltkytevrasrq
laqqkvnecvksqskrygfcgngthifsivnaapeglvflhtvllptqykdveawsglcv
dgtngyvlrqpnlalykegnyyritsrimfepriptmadfvqiencnvtfvnisrselqt
ivpey

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6u7hC (C:)
mfvllvayallhiagcqttnglntsysvcngcvgysenvfavesggyipsdfafnnwfll
tntssvvdgvvrsfqplllnclwsvsglrfttgfvyfngtgrgdckgfssdvlsdviryn
lnfeenlrrgtilfktsygvvvfyctnntlvsgdahipfgtvlgnfycfvnttigtetts
afvgalpktvrefvisrtghfyingyryftlgnveavnfnvttaettdfftvalasyadv
lvnvsqtsianiiycnsvinrlrcdqlsfyvpdgfystspiqsvelpvsivslpvyhkhm
fivlyvdfkpqsgggkcfncypagvnitlanfnetkgplcvdtshfttkyvavyanvgrw
sasintgncpfsfgkvnnfvkfgsvcfslkdipggcampivanwayskyytigtlyvsws
dgdgitgvpqpvegvssfmnvtldkctkyniydvsgvgvirvsndtflngitytstsgnl
lgfkdvtkgtiysitpcnppdqlvvyqqavvgamlsenftsygfsnvvelpkffyasngt
ynctdavltyssfgvcadgsiiavqprnvsydsvsaivtanlsipsnwtisvqveylqit
stpivvdcstyvcngnvrcvellkqytsacktiedalrnsarlesadvsemltfdkkaft
lanvssfgdynlssvipslptsgsrvagrsaiedilfskivtsglgtvdadyknctkgls
iadlacaqyyngimvlpgvadaermamytgsliggialggltsavsipfslaiqarlnyv
alqtdvlqenqkilaasfnkamtnivdaftgvndaitqtsqalqtvatalnkiqdvvnqq
gnslnhltsqlrqnfqaisssiqaiydrldppqadqqvdrlitgrlaalnvfvshtltky
tevrasrqlaqqkvnecvksqskrygfcgngthifsivnaapeglvflhtvllptqykdv
eawsglcvdgtngyvlrqpnlalykegnyyritsrimfepriptmadfvqiencnvtfvn
isrselqtivpeyidvnktlqelsyklpnytvpdlvveqynqtilnltseistlenksae
lnytvqklqtlidninstlvdlkwlnrvetyiksggyipeaprdgqayvrkdgewvllst
flnsenlyfqsgshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6u7hC (C:)
envfavesggyipsdfafnnwflltntssvvdgvvrsfqplllnclwsvsglrfttgfvy
fngtgrgdckgfssdvlsdvirynlnfeenlrrgtilfktsygvvvfyctnnlgnfycfv
nttigtettsafvgalpktvrefvisrtghfyingyryftlgnveavnfnvttaettdff
tvalasyadvlvnvsqtsianiiycnsvinrlrcdqlsfyvpdgfystspiqsvelpvsi
vslpvyhkhmfivlyvdfkpqsgggkcfncypagvnitlanfnetkgplcvdtshfttky
vavyanvgrwsasintgncpfsfgkvnnfvkfgsvcfslkdipggcampivanwayskyy
tigtlyvswsdgdgitgvpqpvegvssfmnvtldkctkyniydvsgvgvirvsndtflng
itytstsgnllgfkdvtkgtiysitpcnppdqlvvyqqavvgamlsenftsygfsnvvel
pkffyasngtynctdavltyssfgvcadgsiiavqsaivtanlsipsnwtisvqveylqi
tstpivvdcstyvcngnvrcvellkqytsacktiedalrnsarlesadvsemltfdkkaf
tlanvssfgdynlssvipslptsgsrvagrsaiedilfskivtsglgtvdadyknctkgl
siadlacaqyyngimvlpgvadaermamytgsliggialpfslaiqarlnyvalqtdvlq
enqkilaasfnkamtnivdaftgvndaitqtsqalqtvatalnkiqdvvnqqgnslnhlt
sqlrqnfqaisssiqaiydrldppqadqqvdrlitgrlaalnvfvshtltkytevrasrq
laqqkvnecvksqskrygfcgngthifsivnaapeglvflhtvllptqykdveawsglcv
dgtngyvlrqpnlalykegnyyritsrimfepriptmadfvqiencnvtfvnisrselqt
ivpey