PDB entry 6u55

View 6u55 on RCSB PDB site
Description: Anti-Zaire ebolavirus Nucleoprotein Single Domain Antibody Zaire E (ZE) Complexed with Sudan ebolavirus Nucleoprotein C-terminal Domain 634-738
Class: immune system
Keywords: Antibody, nanobody, Ebola, filovirus, IMMUNE SYSTEM
Deposited on 2019-08-26, released 2019-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Anti-Zaire ebolavirus Nucleoprotein Single Domain Antibody Zaire E (ZE)
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U55 (Start-116)
    Domains in SCOPe 2.08: d6u55a1, d6u55a2
  • Chain 'B':
    Compound: nucleoprotein
    Species: Sudan ebolavirus (strain Boniface-76) [TaxId:128948]
    Gene: NP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6u55b_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6u55A (A:)
qvqlqesggglvqpggslrlsctasgftlaeygvgwfrqapgkerelvaliavggtthsi
dsvkgrftisrdnmkntvylqmnslnvedtavyycnayssaydrnywgqgtqvtvss

    Sequence, based on observed residues (ATOM records): (download) 
    >6u55A (A:)
vqlqesggglvqpggslrlsctasgftlaeygvgwfrqapgkerelvaliavggtthsid
svkgrftisrdnmkntvylqmnslnvedtavyycnayssaydrnywgqgtqvtvss

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6u55B (B:)
kihhhhhhgggsesealpinskkssaleetyyhllktqgpfeainyyhlmsdepiafste
sgkeyifpdsleeayppwlsekealekenrylvidgqqflwpvmslrdkflavlqhd

    Sequence, based on observed residues (ATOM records): (download) 
    >6u55B (B:)
alpinskkssaleetyyhllktqgpfeainyyhlmsdepiafstesgkeyifpdsleeay
ppwlsekealekenrylvidgqqflwpvmslrdkflavlqh