PDB entry 6u54

View 6u54 on RCSB PDB site
Description: Anti-Zaire ebolavirus Nucleoprotein Single Domain Antibody Zaire C (ZC) Complexed with Zaire ebolavirus Nucleoprotein C-terminal Domain 634-739
Class: immune system
Keywords: Antibody, nanobody, Ebola, filovirus, IMMUNE SYSTEM
Deposited on 2019-08-26, released 2019-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Anti-Zaire ebolavirus Nucleoprotein Single Domain Antibody Zaire C (ZC)
    Species: Lama glama [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U54 (Start-113)
    Domains in SCOPe 2.08: d6u54a_
  • Chain 'B':
    Compound: nucleoprotein
    Species: Zaire ebolavirus (strain Kikwit-95) [TaxId:128951]
    Gene: NP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6u54b_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6u54A (A:)
kvqlqqsgggsvtpggslrlscaasgsisdfaamawyrqapgkerdwvgtifsagallya
epvkgrftisrdnakntvylqmnslkpedtavyycrlyaeaiywgqgtqvtvss

    Sequence, based on observed residues (ATOM records): (download) 
    >6u54A (A:)
vqlqqsgggsvtpggslrlscaasgsisdfaamawyrqapgkerdwvgtifsagallyae
pvkgrftisrdnakntvylqmnslkpedtavyycrlyaeaiywgqgtqvtvss

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6u54B (B:)
kihhhhhhgggsarnqdsdntqpehsfeemyrhilrsqgpfdavlyyhmmkdepvvfsts
dgkeytypdsleeeyppwltekeamneenrfvtldgqqfywpvmnhknkfmailqhhq

    Sequence, based on observed residues (ATOM records): (download) 
    >6u54B (B:)
ehsfeemyrhilrsqgpfdavlyyhmmkdepvvfstsdgkeytypdsleeeyppwlteke
amneenrfvtldgqqfywpvmnhknkfmailqhhq