PDB entry 6u1s

View 6u1s on RCSB PDB site
Description: cryo-em structure of a de novo designed 16-helix transmembrane nanopore, tmhc8_r.
Deposited on 2019-08-16, released 2020-08-19
The last revision was dated 2020-08-19, with a file datestamp of 2020-08-14.
Experiment type: EM
Resolution: 7.6 Å
R-factor: N/A
AEROSPACI score: 0.08 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: de novo designed 16-helix transmembrane nanopore, TMHC8_R
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U1S (0-309)
  • Chain 'B':
    Compound: de novo designed 16-helix transmembrane nanopore, TMHC8_R
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U1S (0-309)
  • Chain 'D':
    Compound: de novo designed 16-helix transmembrane nanopore, TMHC8_R
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U1S (0-309)
  • Chain 'F':
    Compound: de novo designed 16-helix transmembrane nanopore, TMHC8_R
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U1S (0-309)
  • Chain 'H':
    Compound: de novo designed 16-helix transmembrane nanopore, TMHC8_R
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U1S (0-309)
  • Chain 'J':
    Compound: de novo designed 16-helix transmembrane nanopore, TMHC8_R
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U1S (0-309)
  • Chain 'L':
    Compound: de novo designed 16-helix transmembrane nanopore, TMHC8_R
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U1S (0-309)
  • Chain 'N':
    Compound: de novo designed 16-helix transmembrane nanopore, TMHC8_R
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U1S (0-309)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6u1sA (A:)
eefmaraisaiaelakkaieaiyrladnhttdtfmakaieaiaelakeaikaiadlaknh
tteefmaraisaiaelarkaidaiyrlarnhttdtfmakaieaiaelakeaikaiadlak
nhttedfmdeaisaiaelarkaieailrlasnltsetymrkaqeaiekiartaeeairdl
arnledqerreraksardeikrfaedarkkievlallkrsreylkkvaliqlviafvfli
llillswrseelireleekgaaseaelarmkqqhmtaylqaaltaweiisksviallllq
qnqlnlelrh

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6u1sB (B:)
eefmaraisaiaelakkaieaiyrladnhttdtfmakaieaiaelakeaikaiadlaknh
tteefmaraisaiaelarkaidaiyrlarnhttdtfmakaieaiaelakeaikaiadlak
nhttedfmdeaisaiaelarkaieailrlasnltsetymrkaqeaiekiartaeeairdl
arnledqerreraksardeikrfaedarkkievlallkrsreylkkvaliqlviafvfli
llillswrseelireleekgaaseaelarmkqqhmtaylqaaltaweiisksviallllq
qnqlnlelrh

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6u1sD (D:)
eefmaraisaiaelakkaieaiyrladnhttdtfmakaieaiaelakeaikaiadlaknh
tteefmaraisaiaelarkaidaiyrlarnhttdtfmakaieaiaelakeaikaiadlak
nhttedfmdeaisaiaelarkaieailrlasnltsetymrkaqeaiekiartaeeairdl
arnledqerreraksardeikrfaedarkkievlallkrsreylkkvaliqlviafvfli
llillswrseelireleekgaaseaelarmkqqhmtaylqaaltaweiisksviallllq
qnqlnlelrh

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6u1sF (F:)
eefmaraisaiaelakkaieaiyrladnhttdtfmakaieaiaelakeaikaiadlaknh
tteefmaraisaiaelarkaidaiyrlarnhttdtfmakaieaiaelakeaikaiadlak
nhttedfmdeaisaiaelarkaieailrlasnltsetymrkaqeaiekiartaeeairdl
arnledqerreraksardeikrfaedarkkievlallkrsreylkkvaliqlviafvfli
llillswrseelireleekgaaseaelarmkqqhmtaylqaaltaweiisksviallllq
qnqlnlelrh

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6u1sH (H:)
eefmaraisaiaelakkaieaiyrladnhttdtfmakaieaiaelakeaikaiadlaknh
tteefmaraisaiaelarkaidaiyrlarnhttdtfmakaieaiaelakeaikaiadlak
nhttedfmdeaisaiaelarkaieailrlasnltsetymrkaqeaiekiartaeeairdl
arnledqerreraksardeikrfaedarkkievlallkrsreylkkvaliqlviafvfli
llillswrseelireleekgaaseaelarmkqqhmtaylqaaltaweiisksviallllq
qnqlnlelrh

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >6u1sJ (J:)
eefmaraisaiaelakkaieaiyrladnhttdtfmakaieaiaelakeaikaiadlaknh
tteefmaraisaiaelarkaidaiyrlarnhttdtfmakaieaiaelakeaikaiadlak
nhttedfmdeaisaiaelarkaieailrlasnltsetymrkaqeaiekiartaeeairdl
arnledqerreraksardeikrfaedarkkievlallkrsreylkkvaliqlviafvfli
llillswrseelireleekgaaseaelarmkqqhmtaylqaaltaweiisksviallllq
qnqlnlelrh

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6u1sL (L:)
eefmaraisaiaelakkaieaiyrladnhttdtfmakaieaiaelakeaikaiadlaknh
tteefmaraisaiaelarkaidaiyrlarnhttdtfmakaieaiaelakeaikaiadlak
nhttedfmdeaisaiaelarkaieailrlasnltsetymrkaqeaiekiartaeeairdl
arnledqerreraksardeikrfaedarkkievlallkrsreylkkvaliqlviafvfli
llillswrseelireleekgaaseaelarmkqqhmtaylqaaltaweiisksviallllq
qnqlnlelrh

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records:
    >6u1sN (N:)
eefmaraisaiaelakkaieaiyrladnhttdtfmakaieaiaelakeaikaiadlaknh
tteefmaraisaiaelarkaidaiyrlarnhttdtfmakaieaiaelakeaikaiadlak
nhttedfmdeaisaiaelarkaieailrlasnltsetymrkaqeaiekiartaeeairdl
arnledqerreraksardeikrfaedarkkievlallkrsreylkkvaliqlviafvfli
llillswrseelireleekgaaseaelarmkqqhmtaylqaaltaweiisksviallllq
qnqlnlelrh