PDB entry 6u0o

View 6u0o on RCSB PDB site
Description: crystal structure of a peptidoglycan release complex, sagb-spdc, in lipidic cubic phase
Deposited on 2019-08-14, released 2020-09-23
The last revision was dated 2021-01-06, with a file datestamp of 2021-01-01.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lysostaphin resistance protein A
    Species: Staphylococcus aureus (strain bovine RF122 / ET3-1) [TaxId:273036]
    Gene: lyrA, SAB2212
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: LYZ2 domain-containing protein
    Species: Staphylococcus aureus (strain NCTC 8325) [TaxId:93061]
    Gene: SAOUHSC_01895
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2FXF4 (Start-283)
      • expression tag (284-292)
  • Chain 'D':
    Compound: FLAG peptide
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6U0O
  • Heterogens: FLC, PG4, OLC, SO4, AE3, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6u0oA (A:)
dykddddlevlfqgpggssteymknnkisgfqwamtifvffvitmalsimlrdfqsiigv
khfifevtdlapliaaiicilvfkykkvqlaglkfsislkvierlllalilpliiliigm
ysfntfadsfillqstglsvpithilighilmafvvefgfrsylqnivetkmntffasiv
vglmysvfsanttygtefaaynflytfsfsmilgeliratkgrtiyiattfhasmtfgli
flfseeigdlfsikviaistaivavgyiglsliirgia

    Sequence, based on observed residues (ATOM records):
    >6u0oA (A:)
isgfqwamtifvffvitmalsimlrdfqsiigvkhfifevtdlapliaaiicilvfkykk
vqlaglkfsislkvierlllalilpliiliigmysfntfadsfillqstglsvpithili
ghilmafvvefgfrsylqnivetkmntffasivvglmysvfsanttygtefaaynflytf
sfsmilgeliratkgrtiyiattfhasmtfgliflfseeigdlfsikviaistaivavgy
iglsliir

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6u0oB (B:)
mnkhkkgsifgiiglvvifavvsflffsmisdqiffkhvksdikieklnvtlndaakkqi
nnytsqqvsnkkndawrdasateiksamdsgtfidnekqkyqfldlskyqgidknrikrm
lvdrptllkhtddflkaakdkhvnevylishalletgavkselangveidgkkyynfygv
galdkdpiktgaeyakkhgwdtpekaisggadfihkhflsstdqntlysmrwnpknpgeh
qyatdikwaesnatiiadfyknmktegkyfkyfvykddskhlnkklaaalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6u0oB (B:)
kgsifgiiglvvifavvsflffsmisdqiffkhvksdikieklnvtlndaakkqinnyts
qqvsnkkndawrdasateiksamdsgtfidnekqkyqfldlskyqgidknrikrmlvdrp
tllkhtddflkaakdkhvnevylishalletgavkselangveidgkkyynfygvgaldk
dpiktgaeyakkhgwdtpekaisggadfihkhflsstdqntlysmrwnpknpgehqyatd
ikwaesnatiiadfyknmktegkyfkyfvykddskhlnkklaaalehh

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6u0oD (D:)
dykddddk

    Sequence, based on observed residues (ATOM records):
    >6u0oD (D:)
kdddd