PDB entry 6u06
View 6u06 on RCSB PDB site
Description: Discovery of Lysine-Targeted eIF4E Inhibitors through Covalent Docking
Class: translation
Keywords: cap-binding site, anti-neoplastic, inhibitor, translation initiation blocking, TRANSLATION, TRANSLATION-INHIBITOR complex
Deposited on
2019-08-13, released
2019-10-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-03-25, with a file datestamp of
2020-03-20.
Experiment type: XRAY
Resolution: 1.96 Å
R-factor: N/A
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: eukaryotic translation initiation factor 4e
Species: Mus musculus [TaxId:10090]
Gene: eif4e
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6u06a_ - Chain 'B':
Compound: eukaryotic translation initiation factor 4e
Species: Mus musculus [TaxId:10090]
Gene: eif4e
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6u06b_ - Chain 'C':
Compound: eukaryotic translation initiation factor 4e
Species: Mus musculus [TaxId:10090]
Gene: eif4e
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6u06c_ - Chain 'D':
Compound: eukaryotic translation initiation factor 4e
Species: Mus musculus [TaxId:10090]
Gene: eif4e
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6u06d_ - Heterogens: EI8, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6u06A (A:)
vanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmp
gcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysd
dvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatks
gsttknrfvv
Sequence, based on observed residues (ATOM records): (download)
>6u06A (A:)
npehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgc
dyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddv
cgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatknrf
vv
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6u06B (B:)
vanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmp
gcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysd
dvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatks
gsttknrfvv
Sequence, based on observed residues (ATOM records): (download)
>6u06B (B:)
npehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgc
dyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddv
cgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatknrf
vv
- Chain 'C':
Sequence, based on SEQRES records: (download)
>6u06C (C:)
vanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmp
gcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysd
dvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatks
gsttknrfvv
Sequence, based on observed residues (ATOM records): (download)
>6u06C (C:)
vanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmp
gcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysd
dvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtknrf
vv
- Chain 'D':
Sequence, based on SEQRES records: (download)
>6u06D (D:)
vanpehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmp
gcdyslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysd
dvcgavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatks
gsttknrfvv
Sequence, based on observed residues (ATOM records): (download)
>6u06D (D:)
npehyikhplqnrwalwffkndkskwqanlrliskfdtvedfwalynhiqlssnlmpgcd
yslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvc
gavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatkknrf
vv