PDB entry 6tyn

View 6tyn on RCSB PDB site
Description: salmonella typhi pltb homopentamer with neu-5nac-9oac-alpha-2-3-gal- beta-1-4-glcnac glycans
Deposited on 2019-08-09, released 2020-02-12
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Pertussis like toxin subunit B
  Species: Salmonella typhi [TaxId:90370]
  Gene: STY1891, t1107, ABP05_22510, AXU46_23480, E2E79_23180, E2E83_22990, E2F00_23020, E2F08_23180, E2F09_23155, E2F13_22745, PltB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8Z6A3 (0-113)
• Chain 'B':
  Compound: Pertussis like toxin subunit B
  Species: Salmonella typhi [TaxId:90370]
  Gene: STY1891, t1107, ABP05_22510, AXU46_23480, E2E79_23180, E2E83_22990, E2F00_23020, E2F08_23180, E2F09_23155, E2F13_22745, PltB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8Z6A3 (0-113)
• Chain 'C':
  Compound: Pertussis like toxin subunit B
  Species: Salmonella typhi [TaxId:90370]
  Gene: STY1891, t1107, ABP05_22510, AXU46_23480, E2E79_23180, E2E83_22990, E2F00_23020, E2F08_23180, E2F09_23155, E2F13_22745, PltB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8Z6A3 (0-113)
• Chain 'D':
  Compound: Pertussis like toxin subunit B
  Species: Salmonella typhi [TaxId:90370]
  Gene: STY1891, t1107, ABP05_22510, AXU46_23480, E2E79_23180, E2E83_22990, E2F00_23020, E2F08_23180, E2F09_23155, E2F13_22745, PltB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8Z6A3 (0-113)
• Chain 'E':
  Compound: Pertussis like toxin subunit B
  Species: Salmonella typhi [TaxId:90370]
  Gene: STY1891, t1107, ABP05_22510, AXU46_23480, E2E79_23180, E2E83_22990, E2F00_23020, E2F08_23180, E2F09_23155, E2F13_22745, PltB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8Z6A3 (0-113)
• Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records:
  

  >6tynA (A:)
  ewtgdntnayysdeviselhvgqidtspyfciktvkangsgtpvvacavskqsiwapsfk
  elldqaryfystgqsvrihvqkniwtyplfvntfsanalvglsscsatqcfgpk
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records:
  

  >6tynB (B:)
  ewtgdntnayysdeviselhvgqidtspyfciktvkangsgtpvvacavskqsiwapsfk
  elldqaryfystgqsvrihvqkniwtyplfvntfsanalvglsscsatqcfgpk
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records:
  

  >6tynC (C:)
  ewtgdntnayysdeviselhvgqidtspyfciktvkangsgtpvvacavskqsiwapsfk
  elldqaryfystgqsvrihvqkniwtyplfvntfsanalvglsscsatqcfgpk
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records:
  

  >6tynD (D:)
  ewtgdntnayysdeviselhvgqidtspyfciktvkangsgtpvvacavskqsiwapsfk
  elldqaryfystgqsvrihvqkniwtyplfvntfsanalvglsscsatqcfgpk
  

  
  
• Chain 'E':
  Sequence; same for both SEQRES and ATOM records:
  

  >6tynE (E:)
  ewtgdntnayysdeviselhvgqidtspyfciktvkangsgtpvvacavskqsiwapsfk
  elldqaryfystgqsvrihvqkniwtyplfvntfsanalvglsscsatqcfgpk