PDB entry 6tuo

View 6tuo on RCSB PDB site
Description: crystal structure of archaeoglobus fulgidus argonaute protein with cognate dna oligoduplex 5'-pattgtacgtacaat
Deposited on 2020-01-07, released 2021-01-27
The last revision was dated 2021-01-27, with a file datestamp of 2021-01-22.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Piwi protein AF_1318
    Species: Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) [TaxId:224325]
    Gene: AF_1318
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: 5'-d(*ap*tp*tp*gp*tp*ap*cp*gp*tp*ap*cp*ap*ap*tp)-3'
    Species: Escherichia coli, synthetic [TaxId:562]
  • Chain 'S':
    Compound: 5'-d(*ap*tp*tp*gp*tp*ap*cp*gp*tp*ap*cp*ap*ap*tp)-3'
    Species: Escherichia coli, synthetic [TaxId:562]
  • Heterogens: MG, CL, BME, PEG, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6tuoA (A:)
mgsshhhhhhsqdpmmeykivengltyrigngasvpisntgelikglrnygpyevpslky
nqialihnnqfsslinqlksqisskidevwhihninisefiydsphfdsiksqvdnaidt
gvdgimlvlpeyntplyyklksylinsipsqfmrydilsnrnltfyvdnllvqfvsklgg
kpwilnvdpekgsdiiigtgatridnvnlfcfamvfkkdgtmlwneispivtsseyltyl
kstikkvvygfkksnpdwdvekltlhvsgkrpkmkdgetkilketveelkkqemvsrdvk
yailhlnethpfwvmgdpnnrfhpyegtkvklsskrylltllqpylkrnglemvtpikpl
sveivsdnwtseeyyhnvheildeiyylskmnwrgfrsrnlpvtvnypklvagiianvnr
yggypinpegnrslqtnpwfl

    Sequence, based on observed residues (ATOM records):
    >6tuoA (A:)
gltyrigngasvpisntgelikglrnygpyevpslkynqialihnnqfsslinqlksqis
skidevwhihninisefiydsphfdsiksqvdnaidtgvdgimlvlpeyntplyyklksy
linsipsqfmrydilsnrnltfyvdnllvqfvsklggkpwilnvdpekgsdiiigtgatr
idnvnlfcfamvfkkdgtmlwneispivtsseyltylkstikkvvygfkksnpdwdvekl
tlhvsgkrpkmkdgetkilketveelkkqemvsrdvkyailhlnethpfwvmhpyegtkv
klsskrylltllqpylmvtpikplsveivsdnwtseeyyhnvheildeiyylskmnwrgf
rsrnlpvtvnypklvagiianvnryggypinpegnrslqtnpwfl

  • Chain 'R':
    No sequence available.

  • Chain 'S':
    No sequence available.