PDB entry 6tq0

View 6tq0 on RCSB PDB site
Description: crystal structure of the human arc n-lobe bound to repeat peptide 5 from gkap
Deposited on 2019-12-15, released 2021-01-13
The last revision was dated 2021-04-07, with a file datestamp of 2021-04-02.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Activity-regulated cytoskeleton-associated protein
    Species: Homo sapiens [TaxId:9606]
    Gene: ARC, KIAA0278
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: repeat peptide 5 from GKAP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TQ0 (0-7)
  • Chain 'C':
    Compound: Activity-regulated cytoskeleton-associated protein
    Species: Homo sapiens [TaxId:9606]
    Gene: ARC, KIAA0278
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: repeat peptide 5 from GKAP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TQ0
  • Chain 'E':
    Compound: Activity-regulated cytoskeleton-associated protein
    Species: Homo sapiens [TaxId:9606]
    Gene: ARC, KIAA0278
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: repeat peptide 5 from GKAP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TQ0 (Start-7)
  • Chain 'G':
    Compound: Activity-regulated cytoskeleton-associated protein
    Species: Homo sapiens [TaxId:9606]
    Gene: ARC, KIAA0278
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: repeat peptide 5 from GKAP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TQ0 (Start-7)
  • Chain 'I':
    Compound: Activity-regulated cytoskeleton-associated protein
    Species: Homo sapiens [TaxId:9606]
    Gene: ARC, KIAA0278
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: repeat peptide 5 from GKAP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TQ0 (0-7)
  • Chain 'K':
    Compound: Activity-regulated cytoskeleton-associated protein
    Species: Homo sapiens [TaxId:9606]
    Gene: ARC, KIAA0278
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: repeat peptide 5 from GKAP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TQ0 (Start-7)
  • Chain 'M':
    Compound: Activity-regulated cytoskeleton-associated protein
    Species: Homo sapiens [TaxId:9606]
    Gene: ARC, KIAA0278
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: repeat peptide 5 from GKAP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TQ0
  • Chain 'O':
    Compound: Activity-regulated cytoskeleton-associated protein
    Species: Homo sapiens [TaxId:9606]
    Gene: ARC, KIAA0278
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: repeat peptide 5 from GKAP
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TQ0 (0-End)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6tq0A (A:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tq0A (A:)
tqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkke
flqyseg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6tq0B (B:)
mpgcfrmr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6tq0C (C:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tq0C (C:)
tqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkke
flqyseg

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6tq0D (D:)
mpgcfrmr

    Sequence, based on observed residues (ATOM records):
    >6tq0D (D:)
pgcfrm

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6tq0E (E:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tq0E (E:)
dtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkk
eflqyseg

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6tq0F (F:)
mpgcfrmr

    Sequence, based on observed residues (ATOM records):
    >6tq0F (F:)
pgcfrmr

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6tq0G (G:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tq0G (G:)
qifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkkef
lqyseg

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6tq0H (H:)
mpgcfrmr

    Sequence, based on observed residues (ATOM records):
    >6tq0H (H:)
pgcfrmr

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6tq0I (I:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tq0I (I:)
tqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkke
flqyseg

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >6tq0J (J:)
mpgcfrmr

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6tq0K (K:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tq0K (K:)
qifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkkef
lqyseg

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6tq0L (L:)
mpgcfrmr

    Sequence, based on observed residues (ATOM records):
    >6tq0L (L:)
pgcfrmr

  • Chain 'M':
    Sequence, based on SEQRES records:
    >6tq0M (M:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tq0M (M:)
tqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkke
flqyseg

  • Chain 'N':
    Sequence, based on SEQRES records:
    >6tq0N (N:)
mpgcfrmr

    Sequence, based on observed residues (ATOM records):
    >6tq0N (N:)
pgcfrm

  • Chain 'O':
    Sequence, based on SEQRES records:
    >6tq0O (O:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tq0O (O:)
qifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkkef
lqyse

  • Chain 'P':
    Sequence, based on SEQRES records:
    >6tq0P (P:)
mpgcfrmr

    Sequence, based on observed residues (ATOM records):
    >6tq0P (P:)
mpgcfrm