PDB entry 6to8

View 6to8 on RCSB PDB site
Description: neck of empty gta particle computed with c12 symmetry
Deposited on 2019-12-11, released 2020-07-22
The last revision was dated 2020-07-22, with a file datestamp of 2020-07-17.
Experiment type: EM
Resolution: 3.36 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Portal protein Rcc01684
    Species: Rhodobacter capsulatus DE442 [TaxId:1415160]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Adaptor protein Rcc01688
    Species: Rhodobacter capsulatus DE442 [TaxId:1415160]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6to8A (A:)
    mglnffrkaapevrtepvaerkasvtgrivamasgagrpvwgprdtvslmrtgfagnpvg
    frsvkliaeataavplicqdaerryeihpvldllrrpnagqgraelfealigqillsgng
    yleavcpepgvprelhvlrsdrmavvpgadgwpvgydytvggrkhrfdmtghpdpichik
    sfhptddhyglspmqaaavaldvhnaasawskalldnaarpsgaiiykgadgqgvlapeq
    yerlifemethhqgarnagrpmlleggldwkpmgfspsdmefhetkaaaareialafgvp
    pmligipgdatyanyaeanrafyrltvlplltrvsaalawwlsgylgaqielkpdldqvp
    alaverdqlwarigaagflsnsekrvllglpptaeg
    

    Sequence, based on observed residues (ATOM records):
    >6to8A (A:)
    svtgrivamasgagrpvwgprdtvslmrtgfagnpvgfrsvkliaeataavplicqvldl
    lrrpnagqgraelfealigqillsgngyleavcpepgvprelhvlrsdrmavvpgadgwp
    vgydytvggrkhrfdmtghpdpichiksfhptddhyglspmqaaavaldvhnaasawska
    lldnaarpsgaiiykgadgqgvlapeqyerlifemethhqgarnagrpmlleggldwkpm
    gfspsdmefhetkaaaareialafgvppmligipgdatyanyaeanrafyrltvlplltr
    vsaalawwlsgylgaqielkpdldqvpalaverdqlwarigaagflsnsekrvllglppt
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6to8B (B:)
    mmlnevtavpgtalpvaefrdhlrlgtgfadlgaedaallsylraaiaaiegrtakalis
    rgfrlaltawrwgdmqtlpiapvatvtalrlvdaagvetpvaagwrlvpdmarpriealg
    amlpmiptggrveidftagfgaswsalpvdlaqavfllaaqyyelrhdgaaeggampfgv
    malierwrtvrvlggrp
    

    Sequence, based on observed residues (ATOM records):
    >6to8B (B:)
    mmlnevtavpgtalpvaefrdhldaallsylraaiaaiegrtakalisrgfrlaltawrw
    gdmqtlpiapvatvtalrlvdaagvetpvaagwrlvpdmarpriealgamlpmiptggrv
    eidftagfgaswsalpvdlaqavfllaaqyyelrhdgaaampfgvmalierwrtvrvlgg
    rp