PDB entry 6tno

View 6tno on RCSB PDB site
Description: crystal structure of the human arc n-lobe bound to stargazin
Deposited on 2019-12-09, released 2020-12-16
The last revision was dated 2021-04-07, with a file datestamp of 2021-04-02.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Arc_C domain-containing protein
    Species: Felis catus [TaxId:9685]
    Gene: ARC
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Chains: B,D,F
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TNO (Start-7)
  • Chain 'C':
    Compound: Arc_C domain-containing protein
    Species: Felis catus [TaxId:9685]
    Gene: ARC
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Chains: B,D,F
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TNO (Start-7)
  • Chain 'E':
    Compound: Arc_C domain-containing protein
    Species: Felis catus [TaxId:9685]
    Gene: ARC
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Chains: B,D,F
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TNO (0-7)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6tnoA (A:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tnoA (A:)
tqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkke
flqyseg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6tnoB (B:)
ripsyryr

    Sequence, based on observed residues (ATOM records):
    >6tnoB (B:)
ipsyryr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6tnoC (C:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tnoC (C:)
tqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkke
flqyseg

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6tnoD (D:)
ripsyryr

    Sequence, based on observed residues (ATOM records):
    >6tnoD (D:)
ipsyryr

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6tnoE (E:)
gamgpgvdtqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvk
nwvefkkeflqyseg

    Sequence, based on observed residues (ATOM records):
    >6tnoE (E:)
tqifedpreflshleeylrqvggseeywlsqiqnhmngpakkwwefkqgsvknwvefkke
flqyseg

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6tnoF (F:)
ripsyryr