PDB entry 6tkk

View 6tkk on RCSB PDB site
Description: neuropilin 1-b1 domain in a complex with the c-terminal vegfb186 peptide
Deposited on 2019-11-28, released 2020-12-16
The last revision was dated 2020-12-16, with a file datestamp of 2020-12-11.
Experiment type: XRAY
Resolution: 1.06 Å
R-factor: N/A
AEROSPACI score: 0.84 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Neuropilin-1
    Species: Homo sapiens [TaxId:9606]
    Gene: NRP1, NRP, VEGF165R
    Database cross-references and differences (RAF-indexed):
    • Uniprot O14786 (3-157)
      • expression tag (0-2)
  • Chain 'B':
    Compound: ace-arg-pro-gln-pro-arg
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TKK (Start-4)
  • Heterogens: EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6tkkA (A:)
ghmfkcmealgmesgeihsdqitassqystnwsaersrlnypengwtpgedsyrewiqvd
lgllrfvtavgtqgaisketkkkyyvktykidvssngedwitikegnkpvlfqgntnptd
vvvavfpkplitrfvrikpatwetgismrfevygckit

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6tkkB (B:)
rpqpr