PDB entry 6thh

View 6thh on RCSB PDB site
Description: crystal structure of type i-d crispr-cas nuclease cas10d in complex with the sirv3 acrid1 (gp02) anti-crispr protein
Deposited on 2019-11-20, released 2020-10-28
The last revision was dated 2021-06-30, with a file datestamp of 2021-06-25.
Experiment type: XRAY
Resolution: 3.48 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SIRV3 AcrID1 (gp02) anti-CRISPR protein
    Species: Sulfolobus islandicus rudivirus 3 [TaxId:1895333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: SIRV3 AcrID1 (gp02) anti-CRISPR protein
    Species: Sulfolobus islandicus rudivirus 3 [TaxId:1895333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: CRISPR-associated protein, CscA
    Species: Sulfolobus islandicus LAL14/1 [TaxId:1241935]
    Gene: SiL_0609
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MSE, PO4, ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6thhA (A:)
mnykelekmldvifenseikeidlffdpeveiskqefedlvknadplqkvvgdnyitetf
ewwefenqylefeldyyvkdekifvlemhfwrkirklehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6thhA (A:)
mnykelekmldvifenseikeidlffdpeveiskqefedlvknadplqkvvgdnyitetf
ewwefenqylefeldyyvkdekifvlemhfwrkirk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6thhB (B:)
mnykelekmldvifenseikeidlffdpeveiskqefedlvknadplqkvvgdnyitetf
ewwefenqylefeldyyvkdekifvlemhfwrkirklehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6thhB (B:)
mnykelekmldvifenseikeidlffdpeveiskqefedlvknadplqkvvgdnyitetf
ewwefenqylefeldyyvkdekifvlemhfwrkirk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6thhC (C:)
mrnlkrivmgenkliglvrtaldsitlgqgvneakikspqsyafhtisvgtisldickai
yssseigrkqlenlskkynmpfedlwfyggflhdwnklsgkeeslenkeeltkkiidklk
lpneflhgistmaeghlpdnlhlplwvsikladmllisdigsvrdvfyfansdsyrnaie
alkeynlelnyvsstfrlftliaskellndvfneksgyfplisyadgivflkrknsqpvl
lskivdllsrqvfssssevieekisdiekciknkeelfrqmnidvksaiydeegkvkqin
aflptkvckpfedvvgnldnksklqvareviernrkdipfglliyfvnkfskneedyirk
glginekslkyllnigdvqkaldkilellekryaeqssdktllyyvkfsssgniiddlpk
itdrpndycvvcgmpiyssnpvrfvqyaselggraeiwiprekaldeidnvrddwkvcpi
ciyeanlmkdrvkppyfivtfypgvpisllniidfdfsqssikyyideekdtyftafekm
ggrlepyvkkvlpayfsskviikasevsnfslstrlskselnkllpyapmismifltspv
lissnlyempiahervisitstynytfmkslnsnlltlysifaysakydamrkicgrsdl
dnclgylteemdlyssvdpalgvlsigmgvgtpidtdekffsaflpvsgyllkvtgkvsk
mgetlkssifsiayalkdiiksqkvskydvtgflrdgvdmffkttsvikdkedrigisvn
aaisslenkyalddqhraqvysalqdifktlysieeesdrslaisiantlsnwlyiaykl
vlqgdkslehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6thhC (C:)
mrnlkrivmgenkliglvrtaldsitlgqgvneakikspqsyafhtisvgtisldickai
yssseigrkqlenlskkynmpfedlwfyggflhdwnklsgkeenkeeltkkiidklklpn
eflhgistmaeghlpdnlhlplwvsikladmllisdigsvrdvfyfansdsyrnaiealk
eynlelnyvsstfrlftliaskellndvfneksgyfplisyadgivflkrknsqpvllsk
ivdllsrqvfssssevieekisdiekciknkeelfrqmnidvksaiydeegkvkqinafl
ptkvckpfedvvgnldnksklqvareviernrkdipfglliyfvnkfskneedyirkglg
inekslkyllnigdvqkaldkilellekryaeqssdktllyyvkfsssgniiddlpkitd
rpndycvvcgmpiyssnpvrfvqvrddwkvcpiciyeanlmkdrvkppyfivtfypgvpi
sllniidfdfsqssikyyideekdtyftafekmggrlepyvkkvlpayfsskviikasev
snfslstrlskselnkllpyapmismifltspvlissnlyempihervisitstynytfm
kslnsnlltlysifaysakydamrkicgrsdldnclgylteemdlyssvdpalgvlsigm
gvgtpidtdekffsaflpvsgyllkvtgkvskmgetlkssifsiayalkdiiksqkvsky
dvtgflrdgvdmffkttsvikdkedrigisvnaaisslenkyalddqhraqvysalqdif
ktlysieeesdrslaisiantlsnwlyiayklvlqg