PDB entry 6tgg

View 6tgg on RCSB PDB site
Description: scfv-1sm3 in complex with glycopeptide containing an sp2-imino sugar
Deposited on 2019-11-15, released 2020-04-08
The last revision was dated 2021-07-07, with a file datestamp of 2021-07-02.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: ScFv_SM3
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6TGG (0-243)
  • Chain 'P':
    Compound: Mucin-1
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: N8W, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6tggH (H:)
qvqlqesggglvqpggsmklscvasgftfsnywmnwvrqspekglewvaeirlksnnyat
hyaesvkgrftisrddskssvylqmnnlraedtgiyyctgvgqfaywgqgttvtvssssg
gggsgggggssgssdivvtqesalttspgetvtltcrsstgavttsnyanwvqekpdhlf
tgliggtnnrapgvparfsgsligdkaaltitgaqtedeaiyfcalwysnhwvfgggtkl
tvlg

    Sequence, based on observed residues (ATOM records):
    >6tggH (H:)
qvqlqesggglvqpggsmklscvasgftfsnywmnwvrqspekglewvaeirlksnnyat
hyaesvkgrftisrddskssvylqmnnlraedtgiyyctgvgqfaywgqgttvtvsivvt
qesalttspgetvtltcrsstgavttsnyanwvqekpdhlftgliggtnnrapgvparfs
gsligdkaaltitgaqtedeaiyfcalwysnhwvfgggtkltvlg

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >6tggP (P:)
apdtrp