PDB entry 6teq

View 6teq on RCSB PDB site
Description: crystal structure of a galactokinase from bifidobacterium infantis in complex with 2-deoxy-2-fluoro-galactose
Deposited on 2019-11-12, released 2020-06-10
The last revision was dated 2020-09-30, with a file datestamp of 2020-09-25.
Experiment type: XRAY
Resolution: 1.44 Å
R-factor: N/A
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Galactokinase
    Species: Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 [TaxId:391904]
    Gene: Blon_2062
    Database cross-references and differences (RAF-indexed):
    • Uniprot B7GUI0 (0-415)
      • expression tag (416-417)
  • Chain 'B':
    Compound: Galactokinase
    Species: Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 [TaxId:391904]
    Gene: Blon_2062
    Database cross-references and differences (RAF-indexed):
    • Uniprot B7GUI0 (0-415)
      • expression tag (416-417)
  • Chain 'C':
    Compound: Galactokinase
    Species: Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 [TaxId:391904]
    Gene: Blon_2062
    Database cross-references and differences (RAF-indexed):
    • Uniprot B7GUI0 (0-415)
      • expression tag (416-418)
  • Chain 'D':
    Compound: Galactokinase
    Species: Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 [TaxId:391904]
    Gene: Blon_2062
    Database cross-references and differences (RAF-indexed):
    • Uniprot B7GUI0 (0-415)
      • expression tag (416-417)
  • Heterogens: 2FG, GAF, MES, PEG, GOL, CL, EDO, PGE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6teqA (A:)
mtavefiepltheegvsqatklfvdtygaapegvwaapgrvnligehtdynaglclpial
phrtfialkpredtkvrvvsgvapdkvaeadldglkargvdgwsayptgvawalrqagfd
kvkgfdaafvscvplgsglsssaamtcstalalddvyglgygdsdagrvtlinaaiksen
emagastggldqnasmrcteghallldcrpeltplenvsqqefdldkynlellvvdtqap
hqlndgqyaqrratceeaakilgvanlrvtadgiskaddqfqalketldalpdetmkkrv
rhvvteiervrsfvrafaqgdikaagrlfnashdslaadyevtvpeldiavdvarkngay
garmtgggfggsiialvdkgqgheiaqkiadrfekegfnapralpafaaasasreaklaa
alehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6teqA (A:)
mtavefiepltheegvsqatklfvdtygaapegvwaapgrvnligehtdynaglclpial
phrtfialkpredtkvrvvsgvapdkvaeadldglkargvdgwsayptgvawalrqagfd
kvkgfdaafvscvplgsglsssaamtcstalalddvyglgygdsdagrvtlinaaiksen
emagastggldqnasmrcteghallldcrpeltplenvsqqefdldkynlellvvdtqap
hqlndgqyaqrratceeaakilgvanlrvtadgiskaddqfqalketldalpdetmkkrv
rhvvteiervrsfvrafaqgdikaagrlfnashdslaadyevtvpeldiavdvarkngay
garmtgggfggsiialvdkgqgheiaqkiadrfekegfnapralpafaaasasreakl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6teqB (B:)
mtavefiepltheegvsqatklfvdtygaapegvwaapgrvnligehtdynaglclpial
phrtfialkpredtkvrvvsgvapdkvaeadldglkargvdgwsayptgvawalrqagfd
kvkgfdaafvscvplgsglsssaamtcstalalddvyglgygdsdagrvtlinaaiksen
emagastggldqnasmrcteghallldcrpeltplenvsqqefdldkynlellvvdtqap
hqlndgqyaqrratceeaakilgvanlrvtadgiskaddqfqalketldalpdetmkkrv
rhvvteiervrsfvrafaqgdikaagrlfnashdslaadyevtvpeldiavdvarkngay
garmtgggfggsiialvdkgqgheiaqkiadrfekegfnapralpafaaasasreaklaa
alehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6teqB (B:)
mtavefiepltheegvsqatklfvdtygaapegvwaapgrvnligehtdynaglclpial
phrtfialkpredtkvrvvsgvapdkvaeadldglkargvdgwsayptgvawalrqagfd
kvkgfdaafvscvplgsglsssaamtcstalalddvyglgygdsdagrvtlinaaiksen
emagastggldqnasmrcteghallldcrpeltplenvsqqefdldkynlellvvdtqap
hqlndgqyaqrratceeaakilgvanlrvtadgiskaddqfqalketldalpdetmkkrv
rhvvteiervrsfvrafaqgdikaagrlfnashdslaadyevtvpeldiavdvarkngay
garmtgggfggsiialvdkgqgheiaqkiadrfekegfnapralpafaaasasreakl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6teqC (C:)
mtavefiepltheegvsqatklfvdtygaapegvwaapgrvnligehtdynaglclpial
phrtfialkpredtkvrvvsgvapdkvaeadldglkargvdgwsayptgvawalrqagfd
kvkgfdaafvscvplgsglsssaamtcstalalddvyglgygdsdagrvtlinaaiksen
emagastggldqnasmrcteghallldcrpeltplenvsqqefdldkynlellvvdtqap
hqlndgqyaqrratceeaakilgvanlrvtadgiskaddqfqalketldalpdetmkkrv
rhvvteiervrsfvrafaqgdikaagrlfnashdslaadyevtvpeldiavdvarkngay
garmtgggfggsiialvdkgqgheiaqkiadrfekegfnapralpafaaasasreaklaa
alehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6teqC (C:)
mtavefiepltheegvsqatklfvdtygaapegvwaapgrvnligehtdynaglclpial
phrtfialkpredtkvrvvsgvapdkvaeadldglkargvdgwsayptgvawalrqagfd
kvkgfdaafvscvplgsglsssaamtcstalalddvyglgygdsdagrvtlinaaiksen
emagastggldqnasmrcteghallldcrpeltplenvsqqefdldkynlellvvdtqap
hqlndgqyaqrratceeaakilgvanlrvtadgiskaddqfqalketldalpdetmkkrv
rhvvteiervrsfvrafaqgdikaagrlfnashdslaadyevtvpeldiavdvarkngay
garmtgggfggsiialvdkgqgheiaqkiadrfekegfnapralpafaaasasreakla

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6teqD (D:)
mtavefiepltheegvsqatklfvdtygaapegvwaapgrvnligehtdynaglclpial
phrtfialkpredtkvrvvsgvapdkvaeadldglkargvdgwsayptgvawalrqagfd
kvkgfdaafvscvplgsglsssaamtcstalalddvyglgygdsdagrvtlinaaiksen
emagastggldqnasmrcteghallldcrpeltplenvsqqefdldkynlellvvdtqap
hqlndgqyaqrratceeaakilgvanlrvtadgiskaddqfqalketldalpdetmkkrv
rhvvteiervrsfvrafaqgdikaagrlfnashdslaadyevtvpeldiavdvarkngay
garmtgggfggsiialvdkgqgheiaqkiadrfekegfnapralpafaaasasreaklaa
alehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6teqD (D:)
mtavefiepltheegvsqatklfvdtygaapegvwaapgrvnligehtdynaglclpial
phrtfialkpredtkvrvvsgvapdkvaeadldglkargvdgwsayptgvawalrqagfd
kvkgfdaafvscvplgsglsssaamtcstalalddvyglgygdsdagrvtlinaaiksen
emagastggldqnasmrcteghallldcrpeltplenvsqqefdldkynlellvvdtqap
hqlndgqyaqrratceeaakilgvanlrvtadgiskaddqfqalketldalpdetmkkrv
rhvvteiervrsfvrafaqgdikaagrlfnashdslaadyevtvpeldiavdvarkngay
garmtgggfggsiialvdkgqgheiaqkiadrfekegfnapralpafaaasasreakl