PDB entry 6tdc

View 6tdc on RCSB PDB site
Description: PPAR gamma ligand binding domain in complex with MRL-871
Class: gene regulation
Keywords: Nuclear Receptor, NR1C3, Transcription Factor, GENE REGULATION
Deposited on 2019-11-08, released 2020-11-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-11-18, with a file datestamp of 2020-11-13.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: Homo sapiens [TaxId:9606]
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P37231 (21-291)
      • expression tag (18-20)
    Domains in SCOPe 2.08: d6tdca1, d6tdca2
  • Heterogens: 4F1, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6tdcA (A:)
mgsshhhhhhssglvprgshmesadlralakhlydsyiksfpltkakarailtgkttdks
pfviydmnslmmgedkikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipg
fvnldlndqvtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfme
pkfefavkfnalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnh
pessqlfakllqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly

    Sequence, based on observed residues (ATOM records): (download) 
    >6tdcA (A:)
shmesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkev
airifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkd
gvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdr
pgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvik
ktetdmslhpllqeiykdly