PDB entry 6tcw

View 6tcw on RCSB PDB site
Description: crystal structure of bacteroides thetaiotamicron endobt-3987 with man5glcnac product
Deposited on 2019-11-06, released 2020-02-26
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: endo-beta-n-acetylglucosaminidase f1
    Species: Bacteroides thetaiotaomicron VPI-5482 [TaxId:226186]
    Gene: BT_3987
    Database cross-references and differences (RAF-indexed):
  • Heterogens: BMA, MAN, NAG, GOL, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6tcwA (A:)
    gddlevgknidesaysgiyennaylrdgksnlvskvvelhgetyattvkmglsktpntat
    sakvkidaayletynkahntdfalypqdlvtfanegiltvnantksaevemtirageglq
    edktyaipvaisdqssditikdedakhciylvkdmrnagdaykgegvmqgylffevndvn
    plntlsfqlengkllwdvvvlfaaninydaeagrprvqcnpnvqylldnnetllqplrrr
    gvkvllgllgnhditglaqlseqgakdfarevaqyckaynldgvnyddeysnspdlsnps
    ltnpstaaaarlcyetkqampdklvtvfdwgqmygvatvdgvdakewidivvanygsaay
    pigqmtkkqcsgismefnlggggslsaskaqsmidggygwfmgfapspakygsvfsrlqg
    ggevlygsnvaaptifykkndptpykypddl
    

    Sequence, based on observed residues (ATOM records):
    >6tcwA (A:)
    ylrdgksnlvskvvelhgetyattvkmglsktpntatsakvkidaayletynkahntdfa
    lypqdlvtfanegiltvnantksaevemtirageglqedktyaipvaisdqssditikde
    dakhciylvkdmrnagdaykgegvmqgylffevndvnplntlsfqlengkllwdvvvlfa
    aninydaeagrprvqcnpnvqylldnnetllqplrrrgvkvllgllgnhditglaqlseq
    gakdfarevaqyckaynldgvnyddeysnspdlsnpsltnpstaaaarlcyetkqampdk
    lvtvfdwgqmygvatvdgvdakewidivvanygsaaypigqmtkkqcsgismefnlgggg
    slsaskaqsmidggygwfmgfapspakygsvfsrlqgggevlygsnvaaptifykkndpt
    pykypddl