PDB entry 6tax

View 6tax on RCSB PDB site
Description: mouse rnf213 wild type protein
Deposited on 2019-10-31, released 2020-07-01
The last revision was dated 2021-01-13, with a file datestamp of 2021-01-08.
Experiment type: EM
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNF213,E3 ubiquitin-protein ligase RNF213,E3 ubiquitin-protein ligase RNF213
    Species: Mus musculus [TaxId:10090]
    Gene: Rnf213, Mystr
    Database cross-references and differences (RAF-indexed):
    • PDB 6TAX (0-66)
    • Uniprot E9Q555 (67-4624)
      • expression tag (4625-4626)
  • Heterogens: ATP, ZN, MG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6taxA (A:)
    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
    xxxxxxxkltlglsilfmveaaeftvpkkdldslcyllipsagspealhsdlspvlrirq
    rwriyltnlclrcidercdrwlgilpllhtcmqksppkknsksqpedtwaglegisfsef
    rdkaptrsqplqfmqskmallrvdeylfrswlsvvpleslssylensidylsdvpvrvld
    clqgisyrlpglrkisnqnmkkdvenvfkmlmhlvdiyqhrifgenllqiyltecltlhe
    tvcnitanhqffeipalsaelickllelsppghtdeglpeksyedlvtstlqealattrn
    wlrslfksrmlsissayvrltyseemavwrrlveigfpekhgwkgsllgdmegrlkqepp
    rlqisffcssqcrdgglhdsvsrsfekcvieavssacqsqtsvleglscqdlqkfgtlls
    avitkswpvhngepvfdvdeifkyllkwpdvrqlfelcgtnekiidniteegrqlmatae
    svfqkvagelengtivvgqlelilehqsqfldiwnlnrrrlpsqekacdvrsllkrrrdd
    llflkqekryvesllrqlgrvkhlvqvdfgnieiihsqdlsnkklneaviklpnsssykr
    ethyclspdiremaskldslkdshifqdfwqetaeslntldkdprelkvslpevleylyn
    pcydnfytlyenlksgkitfaevdaifkdfvdkydelkndlkfmctmnpqdqkgwiserv
    gqikeyhtlhqavssakvilqvrralgvtgdfsvlnpllnfadsfedfgnekldqispqf
    ikakqllqdiseprqrcleelarqtelvawlhkaledinelkvfvdlasisagendidvd
    rvacfhdavqgyasllykmdertnfsdfmnhlqelwraldndqhlpdklkdsarnlewlk
    tvkeshgsvelsslslatainsrgvyvieapkdgqkispdtvlrlllpdghgypealrty
    steelkellnklmlmsgkkdhnsntevekfsevfsnmqrlvhvfiklhcagnmlfrtwta
    kvyccpdggifmnfglellsqltekgdviqllgalcrqmedfldnwktvvaqkraehfyl
    nfytaeqlvylsselrkprpseaalmmlsfikgkctvqdlvqatsaceskadryclrevm
    kklpqqllsepslmgklqvimmqslvymsaflphcldldalgrclahlatmggtpverpl
    pkglqagqpnlilcghsevlpaalaiymqaprqplptfdevllctpattieevelllrrc
    ltsgsqghkvysllfadqlsyevgcqaeeffqslctrahredyqlvilcdaarehcyips
    tfsqykvplvpqaplpniqaylqshyqvpkrllsaatvfrdglcvgivtseragvgksly
    vntlhtklkaklrdetvplkiirltephldenqvlsallpflkekyqkmpvifhidists
    vqtgipiflfkllilqylmdingkiwrrspghlylveipqglsvqpkrssklnaraplfk
    fldlfpkvtcrppkevidmeltpershtdpamdpvefcseafqrpyqylkrfhqqqnldt
    fqyekgsvegspeeclqhfliycglinpswselrnfawflncqlkdceasifcksaftgd
    tlrgfknfvvtfmilmardfatptlhtsdqspgrqsvtigevveedlapfslrkrwesep
    hpyvffngdhmtmtfigfhletnnngyvdainpsngkvikkdvmtkelfdglrlqrvpfn
    idfdnlpryeklerlclalgiewpidpdetyelttdnmlkilaiemrfrcgipviimget
    gcgktrlikflsdlkrgsveaetmklvkvhggttpsmiyskvkeaertafsnkaqhkldt
    ilffdeantteavscikeilcdrtvdgehlhedsglhiiaacnpyrkhsqemilrlesag
    lgyrvsaeetadrlgsiplrqlvyrvhalppsliplvwdfgqlndsaeklyiqqivqrlv
    dsvsvnpsetcviadvlsasqmfmrkrenecgfvslrdvercvkvfrwfhdhsdmllkel
    dkflhessdsthtferdpvlwslvmaigvcyhasleekasyrtaiarcfpkpynssrail
    devthvqdlflrgapirtniarnlalkenvfmmvicielkiplflvgkpgsskslakiiv
    adamqgqaafselfrclkqvhlvsfqcsphstpqgiistfkqcarfqqgkdlgqyvsvvv
    ldevglaedspkmplktlhplledgcieddpapykkvgfvgisnwaldpakmnrgifvsr
    gspnekeliesaegicssdrlvqdkirgyfapfakayetvcqkqdkeffglrdyyslikm
    vfakakaskrglspqdithavlrnfsgkdniqalsiftaslpearykeevstvelikqni
    ypgpqassrgldgaesryllvltrnyvalqilqqtffegqqpeiifgssfpqdqeytqic
    rninrvkicmetgkmvvllnlqnlyeslydalnqyyvylggqkyvdlglgthrvkcrvht
    afrlivieekdvvykqfpvplinrlekhyldmntvlqpwqksivqelqqwahefadvkad
    qfiarhkyspadvfigyhsdacasvvlqaverqgcrdlteelyrkvseearsilldcatp
    davvrlsgsslgsftakqlsqeyyyaqqhnsfvdflqahlrmthhecravfteittfsrl
    ltgndcdvlaselrglaskpvvlslqqydteysflkdvrswltnpgkrkvlviqadfddg
    trsaqlvasakytaineinktqgtkdfvfvyfvtklsrmgsgtsyvgfhgglwrsvhidd
    lrrstimasdvtklqnvtisqlfkpedkpeqeemeietsqskelaeeqmevedseemkka
    sdprscdcsqfldttrlvqscvqgavgmlrdqnescarnmrrvtilldllnedntrnasf
    lreskmrlhvllnkqeenqvrslkewvtreaanqdalqeagtfrhtlwkrvqdvvtpila
    smiahidrdgnlellaqpdspawvqdlwmfiysdikflnislvlnntrsnsemsfilvqs
    hmnllkdaynavpfswrirdyleelwvqaqyitdteglskkfveifqktplgvflaqfpv
    aqqqkllqsylkdfllltmkvssreelmflqmalwsclrelqeasgtpdetykfplslpw
    vhlafqhfrtrlqnfsriltihpqvlsslsqaaekhslagcemtldafaamacaemlkgd
    llkpspkawlqlvknlstplelvcsegylcdsgsmtrsviqevralwnrifsialfvehv
    llgteshipelsplvttyvslldkcleedsnlktcrpfvavmttlcdckdkaskkfsrfg
    iqpcfichgdaqdpvclpcdhvyclrciqtwlipgqmmcpycltdlpdkfsptvsqdhrk
    aiekhaqfrhmcnsffvdlvstmcfkdntppeksvidtllsllfvqkellrdasqkhreh
    tkslspfddvvdqtpvirsvllklllkysfhevkdyiqnyltqlekkafltedktelyll
    fiscledsvhqktsagcrnleqvlreeghflrtyspglqgqepvriasveylqevarvrl
    cldlaadflselqegselaedkrrflkhveefctrvnndwhrvylvrklssqrgmefvqs
    fskqghpcqwvfprkviaqqkdhvslmdrylvhgneykavrdatakavlecktldignal
    macrspkpqqtaylllalytevaalyrspngslhpeakqleavnkfikeskilsdpnirc
    farslvdntlpllkirsansilkgtvtemavhvatillcghnqilkplrnlafypvnman
    aflptmpedllvhartwrglenvtwytcprghpcsvgecgrpmqestcldcglpvgglnh
    tphegfsairnnedrtqtghvlgspqssgvaevsdrgqspvvfiltrllthlamlvgath
    npqaltviikpwvqdpqgflqqhiqrdleqltkmlgrsadetihvvhlilssllrvqshg
    vlnfnaelstkgcrnnwekhfetlllrelkhldknlpainalisqderissnpvtkiiyg
    dpatflphlpqksiihcskiwscrrkitveylqhiveqkngketvpvlwhflqkeaelrl
    vkflpeilalqrdlvkqfqnvsrveyssirgfihshssdglrkllhdritiflstwnalr
    rsletngeiklpkdyccsdldldaefevilprrqglglcgtalvsylislhnnmvytvqk
    fsnednsysvdisevadlhvisyeverdlnplilsncqyqvqqggetsqefdlekiqrqi
    ssrflqgkprltlkgiptlvyrrdwnyehlfmdiknkmaqsslpnlaistisgqlqsysd
    acealsiieitlgflstaggdpgmdlnvyieevlrmcdqtaqvlkafsrcqlrhiialwq
    flsahkseqrlrlnkelfreidvqykeelstqhqrllgtflneagldafllelhemivlk
    lkgpraansfnpnwslkdtlvsymetkdsdilsevesqfpeeilmsscisvwkiaatrkw
    drqsrggghhhhhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6taxA (A:)
    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
    xxxxxxxkltlglsilfmveaaeftvpkkdldslcyllipsagspealhsdlspvlrirq
    rwriyltnlclrcidercdrwlgilpllhtcmqksppkknsksqpedtwaglegisfsef
    rdkaptrsqplqfmqskmallrvdeylfrswlsvvpleslssylensidylsdvpvrvld
    clqgisyrlpglrkisnqnmkkdvenvfkmlmhlvdiyqhrifgenllqiyltecltlhe
    tvcnitanhqffeipalsaelickllelsppgeksyedlvtstlqealattrnwlrslfk
    srmlsissayvrltyseemavwrrlveigfpekhgwkgsllgdmegrlkqepprlqisff
    cssqcrdgglhdsvsrsfekcvieavssacqsqtsvleglscqdlqkfgtllsavitksw
    pvhngepvfdvdeifkyllkwpdvrqlfelcgtnekiidniteegrqlmataesvfqkva
    gelengtivvgqlelilehqsqfldiwnlnrrrdvrsllkrrrddllflkqekryvesll
    rqlgrvkhlvqvdfgnieiihsqdlsnkklneaviklsykrethyclspdiremasklds
    lkdshifqdfwqetaeslnelkvslpevleylynpcydnfytlyenlksgkitfaevdai
    fkdfvdkydelkndlkfmctmnpqdqkgwiservgqikeyhtlhqavssakvilqvrral
    gvtgdfsvlnpllnfadsfedfgnespqfikakqllqdiseprqrcleelarqtelvawl
    hkaledinelkvfvdlasisagendidvdrvacfhdavqgyasllykmdertnfsdfmnh
    lqelwraldndqhlpdklkdsarnlewlktvkeshgsvelsslslatainsrgvyvieap
    kdgqkispdtvlrlllpdpealrtysteelkellnklmlmsgkkdhnsntevekfsevfs
    nmqrlvhvfiklhcagnmlfrtwtakvyccpdggifmnfglellsqltekgdviqllgal
    crqmedfldnwktvvaqkraehfylnfytaeqlvylsselrkprpseaalmmlsfikgkc
    tvqdlvqatsaceskadryclrevmkklpqqllsepslmgklqvimmqslvymsaflphc
    ldldalgrclahlatmggtpverplpkglqagqpnlilcghsevlpaalaiymqaprqpl
    ptfdevllctpattieevelllrrcltsgsqghkvysllfadqlsyevgcqaeeffqslc
    trahredyqlvilcdaarehcyipstfsqykvplvpqaplpniqaylqshyqvpkrllsa
    atvfrdglcvgivtseragvgkslyvntlhtklkaklrdetvplkiirltephldenqvl
    sallpflkekyqkmpvifhidistsvqtgipiflfkllilqylmdingkiwrrspghlyl
    veipqplfkfldlfpkvtcrppkevidmepamdpvefcseafqrpyqylkrfhqqqnldt
    fqyekgsvegspeeclqhfliycglinpswselrnfawflncqlkdceasifcksaftgd
    tlrgfknfvvtfmilmardfatpteedlapfslrkrwesephpyvffngdhmtmtfigfh
    letnnngyvdainpsngkvikkdvmtkelfdglrlqrvpfnidfdnlpryeklerlclal
    giewpidpdetyelttdnmlkilaiemrfrcgipviimgetgcgktrlikflsdlkrgsv
    eaetmklvkvhggttpsmiyskvkeaertafsnkaqhkldtilffdeantteavscikei
    lcdrtvdgehlhedsglhiiaacnpyrkhsqemilrlesaglgyrvsaeetadrlgsipl
    rqlvyrvhalppsliplvwdfgqlndsaeklyiqqivqrlvdsvsvnpsetcviadvlsa
    sqmfmrkrenecgfvslrdvercvkvfrwfhdhsdmllkeldkflhessdsthtferdpv
    lwslvmaigvcyhasleekasyrtaiarcfpkpynssraildevthvqdlflrgapirtn
    iarnlalkenvfmmvicielkiplflvgkpgsskslakiivadamqgqaafselfrclkq
    vhlvsfqcsphstpqgiistfkqcarfqqgkdlgqyvsvvvldevglaedspkmplktlh
    plledgcieddpapykkvgfvgisnwaldpakmnrgifvsrgspnekeliesaegicssd
    rlvqdkirgyfapfakayetvcqkqdkeffglrdyyslikmvfakakaskrglspqdith
    avlrnfsgkdniqalsiftaslpearykeevstvelikqniypgpgaesryllvltrnyv
    alqilqqtffegqqpeiifgssfpqdqeytqicrninrvkicmetgkmvvllnlqnlyes
    lydalnqyyvylggqkyvdlglgthrvkcrvhtafrlivieekdvvykqfpvplinrlek
    hyldmntvlqpwqksivqelqqwahefadvkadqfiarhkyspadvfigyhsdacasvvl
    qaverqgcrdlteelyrkvseearsilldcatpdavvrlsgsslgsftakqlsqeyyyaq
    qhnsfvdflqahlrmthhecravfteittfsrlltgndcdvlaselrglaskpvvlslqq
    ydteysflkdvrswltnpgkrkvlviqadfddgtrsaqlvasakytaineinktqgtkdf
    vfvyfvtklsrmgsgtsyvgfhgglwrsvhiddlrrstimasdvtklqnvtisqlfkpes
    qfldttrlvqscvqgavgmlrdqnescarnmrrvtilldllnedntrnasflreskmrlh
    vllnkqeenqvrslkewvtreaanqdalqeagtfrhtlwkrvqdvvtpilasmiahidrd
    gnlellaqpdspawvqdlwmfiysdikflnislvsfilvqshmnllkdaynavpfswrir
    dyleelwvqaqyitdteglskkfveifqktplgvflaqfpvaqqqkllqsylkdfllltm
    kvssreelmflqmalwsclrelqeasgtpdetykfplslpwvhlafqhfrtrlqnfsril
    tihpqvlsslsqaaekhslagcemtldafaamacaemlkgdllkpspkawlqlvknlstp
    lelvcsegylcdsgsmtrsviqevralwnrifsialfvehvllgteshipelsplvttyv
    slldkcleedsnlktcrpfvavmttlcdckdkaskkfsrfgiqpcfichgdaqdpvclpc
    dhvyclrciqtwlipgqmmcpycltdlpdkfsptvsqdhrkaiekhaqfrhmcnsffvdl
    vstmcfkdntppeksvidtllsllfvqkellhrehtkslspfddvvdqtpvirsvllkll
    lkysfhevkdyiqnyltqlekkafltedktelyllfiscledsvhqktsagcrnleqvlr
    eeghflrtyspglqgqepvriasveylqevarvrlcldlaadflselqegselaedkrrf
    lkhveefctrvnndwhrvylvrklssqrgmefvqsfskqghpcqwvfprkviaqqkdhvs
    lmdrylvhgneykavrdatakavlecktldignalmacrspkpqqtaylllalytevaal
    yrspngslhpeakqleavnkfikeskilsdpnircfarslvdntlpllkirsansilkgt
    vtemavhvatillcghnqilkplrnlafypvnmanaflptmpedtqtghvlgspqssgva
    evsdrgqspvvfiltrllthlamlvgathnpqaltviikpwvqdpqgflqqhiqrdleql
    tkmlgrsadetihvvhlilssllrvqshgvlnfnaelstkgcrnnwekhfetlllrelkh
    ldknlpainalisqderissnpvtkiiygdpatflphlpqksiihcskiwscrrkitvey
    lqhiveqkngketvpvlwhflqkeaelrlvkflpeilalqrdlvkqfqnvsrveyssirg
    fihshssdglrkllhdritiflstwnalrrsletngeiklpkdyccsdldldaefevilp
    rrqglglcgtalvsylislhnnmvytvqkfsnednsysvdisevadlhvisyeverdlnp
    lilsncqyqvqqggetsqefdlekiqrqissrflqgkprltlkgiptlvyrrdwnyehlf
    mdiknkmaqsslpnlaistisgqlqsysdacealsiieitlgflstaggdpgmdlnvyie
    evlrmcdqtaqvlkafsrcqlrhiialwqflsahkseqrlrlnkelfreidvqykeelst
    qhqrllgtflneagldafllelhemivlklkgpraansfnpnwslkdtlvsymetkdsdi
    lsevesqfpeeilmsscisvwkiaatrkwdrqsrgg