PDB entry 6t9b

View 6t9b on RCSB PDB site
Description: crystal structrue of rsl w31a lectin mutant in complex with alpha- methylfucoside
Deposited on 2019-10-26, released 2020-04-22
The last revision was dated 2020-12-16, with a file datestamp of 2020-12-11.
Experiment type: XRAY
Resolution: 1.46 Å
R-factor: N/A
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (0-End)
      • engineered mutation (30)
  • Chain 'C':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (0-End)
      • engineered mutation (30)
  • Chain 'G':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S4TLR1 (0-End)
      • engineered mutation (30)
  • Chain 'I':
    Compound: fucose-binding lectin protein
    Species: RALSTONIA SOLANACEARUM [TaxId:305]
    Gene: RSP795_21825, RSP799_05830, RSP822_19650, RUN39_v1_50103
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MFU, GLY, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6t9bA (A:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bA (A:)
svqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaihi
rvyastgttttewcwdgngwtkgayta

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6t9bB (B:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bB (B:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgayta

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6t9bC (C:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bC (C:)
svqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaihi
rvyastgttttewcwdgngwtkgayta

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6t9bD (D:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bD (D:)
svqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaihi
rvyastgttttewcwdgngwtkgayta

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6t9bE (E:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bE (E:)
svqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaihi
rvyastgttttewcwdgngwtkgayta

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6t9bF (F:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bF (F:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytat

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6t9bG (G:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bG (G:)
svqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaihi
rvyastgttttewcwdgngwtkgayta

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6t9bH (H:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bH (H:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgayta

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6t9bI (I:)
ssvqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaih
irvyastgttttewcwdgngwtkgaytatn

    Sequence, based on observed residues (ATOM records):
    >6t9bI (I:)
svqtaatswgtvpsirvytanngkitercadgkgwytgafnepgdnvsvtswlvgsaihi
rvyastgttttewcwdgngwtkgaytat