SCOPe 2.08: Structural Classification of Proteins

PDB entry 6t34

View 6t34 on RCSB PDB site
Description: atomic model for turnip mosaic virus (tumv)
Deposited on 2019-10-10, released 2019-11-13
The last revision was dated 2019-11-13, with a file datestamp of 2019-11-08.
Experiment type: EM
Resolution: 5.2 Å
R-factor: N/A
AEROSPACI score: 0 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'B':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'C':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'D':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'E':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'F':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'G':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'H':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'I':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'J':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'K':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'L':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'M':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'N':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'O':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'P':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'Q':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'R':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'S':
Compound: coat protein
Species: Turnip mosaic virus (strain Japanese) [TaxId:12230]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A1B1RVA3 (0-206)
Chain 'a':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'b':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'c':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'd':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'e':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'f':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'g':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'h':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'i':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'j':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'k':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'l':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'm':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'n':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'o':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'p':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'q':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 'r':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]
Chain 's':
Compound: RNA (5'-r(p*up*up*up*up*u)-3')
Species: Turnip mosaic virus [TaxId:12230]

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

Chain 'A':
Sequence; same for both SEQRES and ATOM records:

>6t34A (A:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'B':
Sequence; same for both SEQRES and ATOM records:

>6t34B (B:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'C':
Sequence; same for both SEQRES and ATOM records:

>6t34C (C:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'D':
Sequence; same for both SEQRES and ATOM records:

>6t34D (D:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'E':
Sequence; same for both SEQRES and ATOM records:

>6t34E (E:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'F':
Sequence; same for both SEQRES and ATOM records:

>6t34F (F:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'G':
Sequence; same for both SEQRES and ATOM records:

>6t34G (G:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'H':
Sequence; same for both SEQRES and ATOM records:

>6t34H (H:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'I':
Sequence; same for both SEQRES and ATOM records:

>6t34I (I:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'J':
Sequence; same for both SEQRES and ATOM records:

>6t34J (J:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'K':
Sequence; same for both SEQRES and ATOM records:

>6t34K (K:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'L':
Sequence; same for both SEQRES and ATOM records:

>6t34L (L:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'M':
Sequence; same for both SEQRES and ATOM records:

>6t34M (M:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'N':
Sequence; same for both SEQRES and ATOM records:

>6t34N (N:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'O':
Sequence; same for both SEQRES and ATOM records:

>6t34O (O:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'P':
Sequence; same for both SEQRES and ATOM records:

>6t34P (P:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'Q':
Sequence; same for both SEQRES and ATOM records:

>6t34Q (Q:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'R':
Sequence; same for both SEQRES and ATOM records:

>6t34R (R:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'S':
Sequence; same for both SEQRES and ATOM records:

>6t34S (S:)
prlksltskmrvpryekrvalnldhlilytpeqtdlsntrstrkqfdtwfegvmadyelt
edkmqiilnglmvwciengtspningmwvmmdgddqvefpikplidhakptfrqimahfs
dvaeayiekrnqdrpympryglqrnltdmslaryafdfyemtsrtpirareahiqmkaaa
lrgannnlfgldgnvgttventerhtt

Chain 'a':
No sequence available.
Chain 'b':
No sequence available.
Chain 'c':
No sequence available.
Chain 'd':
No sequence available.
Chain 'e':
No sequence available.
Chain 'f':
No sequence available.
Chain 'g':
No sequence available.
Chain 'h':
No sequence available.
Chain 'i':
No sequence available.
Chain 'j':
No sequence available.
Chain 'k':
No sequence available.
Chain 'l':
No sequence available.
Chain 'm':
No sequence available.
Chain 'n':
No sequence available.
Chain 'o':
No sequence available.
Chain 'p':
No sequence available.
Chain 'q':
No sequence available.
Chain 'r':
No sequence available.
Chain 's':
No sequence available.