PDB entry 6syz
View 6syz on RCSB PDB site
Description: Crystal structure of YTHDC1 with fragment 1 (DHU_DC1_141)
Class: RNA binding protein
Keywords: Fragment, Complex, YTHDC1, Epitranscriptomic, RNA BINDING PROTEIN
Deposited on
2019-10-01, released
2020-03-04
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-04-01, with a file datestamp of
2020-03-27.
Experiment type: XRAY
Resolution: 2.28 Å
R-factor: N/A
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: YTH domain-containing protein 1
Species: Homo sapiens [TaxId:9606]
Gene: YTHDC1, KIAA1966, YT521
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6syza1, d6syza2 - Chain 'B':
Compound: YTH domain-containing protein 1
Species: Homo sapiens [TaxId:9606]
Gene: YTHDC1, KIAA1966, YT521
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6syzb1, d6syzb2 - Heterogens: M1E, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6syzA (A:)
mhhhhhhssgrenlyfqgtsklkyvlqdarffliksnnhenvslakakgvwstlpvnekk
lnlafrsarsvilifsvresgkfqgfarlsseshhggspihwvlpagmsakmlggvfkid
wicrrelpftksahltnpwnehkpvkigrdgqeielecgtqlcllfppdesidlyqvihk
mrh
Sequence, based on observed residues (ATOM records): (download)
>6syzA (A:)
gtsklkyvlqdarffliksnnhenvslakakgvwstlpvnekklnlafrsarsvilifsv
resgkfqgfarlsseshhggspihwvlpagmsakmlggvfkidwicrrelpftksahltn
pwnehkpvkigrdgqeielecgtqlcllfppdesidlyqvihkm
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6syzB (B:)
mhhhhhhssgrenlyfqgtsklkyvlqdarffliksnnhenvslakakgvwstlpvnekk
lnlafrsarsvilifsvresgkfqgfarlsseshhggspihwvlpagmsakmlggvfkid
wicrrelpftksahltnpwnehkpvkigrdgqeielecgtqlcllfppdesidlyqvihk
mrh
Sequence, based on observed residues (ATOM records): (download)
>6syzB (B:)
gtsklkyvlqdarffliksnnhenvslakakgvwstlpvnekklnlafrsarsvilifsv
resgkfqgfarlsseshhggspihwvlpagmsakmlggvfkidwicrrelpftksahltn
pwnehkpvkigrdgqeielecgtqlcllfppdesidlyqvihkm