PDB entry 6sy6

View 6sy6 on RCSB PDB site
Description: tetr in complex with the tetr-binding rna-aptamer k2
Deposited on 2019-09-27, released 2020-02-05
The last revision was dated 2020-04-08, with a file datestamp of 2020-04-03.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tetracycline repressor protein class B from transposon Tn10
    Species: Escherichia coli [TaxId:562]
    Gene: tetR
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04483 (Start-202)
      • conflict (67)
      • conflict (87)
      • conflict (120)
      • conflict (143)
      • conflict (187)
      • conflict (191-192)
      • conflict (194)
      • conflict (196)
      • conflict (198)
      • conflict (201-202)
  • Chain 'B':
    Compound: Tetracycline repressor protein class B from transposon Tn10
    Species: Escherichia coli [TaxId:562]
    Gene: tetR
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04483 (Start-202)
      • conflict (67)
      • conflict (87)
      • conflict (120)
      • conflict (143)
      • conflict (187)
      • conflict (191-192)
      • conflict (194)
      • conflict (196)
      • conflict (198)
      • conflict (201-202)
  • Chain 'D':
    Compound: RNA (36-mer)
    Species: Escherichia coli, synthetic [TaxId:562]

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6sy6A (A:)
msrldkskvinsalellnevgieglttrklaqklgveqptlywhvknkralldalaieml
drhhthfsplegeswqdflrnnaksfrnallshrdgakvhlgtrptekqyetlenqlafl
tqqgfslenalyalsavghftlgsvledqehqvakeeretpttdsmppllrqaielfdhq
gaepaflhgleslirgfevqltallqiv

    Sequence, based on observed residues (ATOM records):
    >6sy6A (A:)
rldkskvinsalellnevgieglttrklaqklgveqptlywhvknkralldalaiemldr
hhthfsplegeswqdflrnnaksfrnallshrdgakvhlgtrptekqyetlenqlafltq
qgfslenalyalsavghftlgsvledqehqvalrqaielfgaepaflhgleslirgfevq
lta

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6sy6B (B:)
msrldkskvinsalellnevgieglttrklaqklgveqptlywhvknkralldalaieml
drhhthfsplegeswqdflrnnaksfrnallshrdgakvhlgtrptekqyetlenqlafl
tqqgfslenalyalsavghftlgsvledqehqvakeeretpttdsmppllrqaielfdhq
gaepaflhgleslirgfevqltallqiv

    Sequence, based on observed residues (ATOM records):
    >6sy6B (B:)
rldkskvinsalellnevgieglttrklaqklgveqptlywhvknkralldalaiemldr
hhthfsplegeswqdflrnnaksfrnallshrdgakvhlgtrptekqyetlenqlafltq
qgfslenalyalsavghftlgsvledqehqvakgaepaflhgleslirgfevqlta

  • Chain 'D':
    No sequence available.