PDB entry 6sxa

View 6sxa on RCSB PDB site
Description: xpf-ercc1 cryo-em structure, apo-form
Deposited on 2019-09-25, released 2020-03-11
The last revision was dated 2020-03-11, with a file datestamp of 2020-03-06.
Experiment type: EM
Resolution: 3.6 Å
R-factor: N/A
AEROSPACI score: 0.06 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'F':
    Compound: DNA repair endonuclease XPF
    Species: Homo sapiens [TaxId:9606]
    Gene: ERCC4, ERCC11, XPF
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: DNA excision repair protein ERCC-1
    Species: Homo sapiens [TaxId:9606]
    Gene: ERCC1
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6sxaF (F:)
    mesgqparriamaplleyerqlvlelldtdglvvcarglgadrllyhflqlhchpaclvl
    vlntqpaeeeyfinqlkiegvehlprrvtneitsnsryevytqggvifatsrilvvdflt
    dripsdlitgilvyrahriiescqeafilrlfrqknkrgfikaftdnavafdtgfchver
    vmrnlfvrklylwprfhvavnsfleqhkpevveihvsmtptmlaiqtaildilnaclkel
    kchnpslevedlslenaigkpfdktirhyldplwhqlgaktkslvqdlkilrtllqylsq
    ydcvtflnlleslratekafgqnsgwlfldsstsmfinararvyhlpdakmskkekisek
    meikegeetkkelvlesnpkwealtevlkeieaenkesealggpgqvlicasddrtcsql
    rdyitlgaeafllrlyrktfekdskaeevwmkfrkedsskrirkshkrpkdpqnkerast
    kertlkkkkrkltltqmvgkpeeleeegdveegyrreissspescpeeikheefdvnlss
    daafgilkepltiihpllgcsdpyaltrvlhevepryvvlydaeltfvrqleiyrasrpg
    kplrvyfliyggsteeqryltalrkekeafeklirekasmvvpeeregrdetnldlvrgt
    asadvstdtrkaggqeqngtqqsivvdmrefrselpslihrrgidiepvtlevgdyiltp
    emcverksisdligslnngrlysqcismsryykrpvlliefdpskpfsltsrgalfqeis
    sndisskltlltlhfprlrilwcpsphataelfeelkqskpqpdaatalaitadsetlpe
    sekynpgpqdfllkmpgvnakncrslmhhvkniaelaalsqdeltsilgnaanakqlydf
    ihtsfaevvskgkgkk
    

    Sequence, based on observed residues (ATOM records):
    >6sxaF (F:)
    riamaplleyerqlvlelldtdglvvcarglgadrllyhflqlhchpaclvlvlntqpae
    eeyfinqlkiegvehlprrvtneitsnsryevytqggvifatsrilvvdfltdripsdli
    tgilvyrahriiescqeafilrlfrqknkrgfikaftdnavafdtgfchvervmrnlfvr
    klylwprfhvavnsfleqhkpevveihvsmtptmlaiqtaildilnaclkelkchnpsle
    vedlslenaigkpfdktirhyldplwhqlgaktkslvqdlkilrtllqylsqydcvtfln
    lleslratekafgqnsgwlfldsstsmfinararvyhlpdakmskkekisekmegeetkk
    elvlesnpkwealtevlkeieaenkesealggpgqvlicasddrtcsqlrdyitlgaeaf
    llrlyrktfltiihpllgcsdpyaltrvlhevepryvvlydaeltfvrqleiyrasrpgk
    plrvyfliyggsteeqryltalrkekeafeklirekasmvtqqsivvdmrefrselpsli
    hrrgidiepvtlevgdyiltpemcverksisdligslnngrlysqcismsryykrpvlli
    efdpskpfsltsrgalfqeissndisskltlltlhfprlrilwcpsphataelfeelkqs
    kpqpdaatalaitadsetlpesekynpgpqdfllkmpgvnakncrslmhhvkniaelaal
    sqdeltsilgnaanakqlydfihtsfa
    

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6sxaG (G:)
    mdpgkdkegvpqpsgpparkkfvipldedevppgvakplfrstqslptvdtsaqaapqty
    aeyaisqplegagatcptgseplagetpnqalkpgaksnsiivsprqrgnpvlkfvrnvp
    wefgdvipdyvlgqstcalflslryhnlhpdyihgrlqslgknfalrvllvqvdvkdpqq
    alkelakmciladctlilawspeeagryletykayeqkpadllmekleqdfvsrvteclt
    tvksvnktdsqtllttfgsleqliaasredlalcpglgpqkarrlfdvlhepflkvp
    

    Sequence, based on observed residues (ATOM records):
    >6sxaG (G:)
    siivsprqrgnpvlkfvrnvpwefgdvipdyvlgqstcalflslryhnlhpdyihgrlqs
    lgknfalrvllvqvdvkdpqqalkelakmciladctlilawspeeagryletykayeqkp
    adllmekleqdfvsrvteclttvksvnktdsqtllttfgsleqliaasredlalcpglgp
    qkarrlfdvlhepflk