PDB entry 6svm

View 6svm on RCSB PDB site
Description: crystal structure of human gfat-1 in complex with glucose-6-phosphate, l-glu, and udp-galnac
Deposited on 2019-09-18, released 2020-01-15
The last revision was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 2.48 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
    Species: Homo sapiens [TaxId:9606]
    Gene: GFPT1, GFAT, GFPT
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
    Species: Homo sapiens [TaxId:9606]
    Gene: GFPT1, GFAT, GFPT
    Database cross-references and differences (RAF-indexed):
  • Heterogens: UD2, G6Q, GLU, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6svmA (A:)
mcgifaylnyhvprtrreiletlikglqrleyrgydsagvgfdggndkdweanackiqli
kkkgkvkaldeevhkqqdmdldiefdvhlgiahtrwathgepspvnshpqrsdknnefiv
ihngiitnykdlkkfleskgydfesetdtetiaklvkymydnresqdtsfttlverviqq
legafalvfksvhfpgqavgtrrgsplligvrsehklstdhipilyrtgkdkkgscnlsr
vdsttclfpveekaveyyfasdasaviehtnrvifledddvaavvdgrlsihrikrtagh
hhhhhdhpgravqtlqmelqqimkgnfssfmqkeifeqpesvvntmrgrvnfddytvnlg
glkdhikeiqrcrrliliacgtsyhagvatrqvleeltelpvmvelasdfldrntpvfrd
dvcfflsqsgetadtlmglryckergaltvgitntvgssisretdcgvhinagpeigvas
tkaytsqfvslvmfalmmcddrismqerrkeimlglkrlpdlikevlsmddeiqklatel
yhqksvlimgrgyhyatclegalkikeitymhsegilagelkhgplalvdklmpvimiim
rdhtyakcqnalqqvvarqgrpvvicdkedtetikntkrtikvphsvdclqgilsviplq
llafhlavlrgydvdfprnlaksvtve

    Sequence, based on observed residues (ATOM records):
    >6svmA (A:)
cgifaylnyhvprtrreiletlikglqrleyrgydsagvgfdggndkdweanackiqlik
kkgkvkaldeevhkqqdmdldiefdvhlgiahtrwathgepspvnshpqrsdknnefivi
hngiitnykdlkkfleskgydfesetdtetiaklvkymydnresqdtsfttlverviqql
egafalvfksvhfpgqavgtrrgsplligvrsehklstdhipilyrsttclfpveekave
yyfasdasaviehtnrvifledddvaavvdgrlsihrikhpgravqtlqmelqqimkgnf
ssfmqkeifeqpesvvntmrgrvnfddytvnlgglkdhikeiqrcrrliliacgtsyhag
vatrqvleeltelpvmvelasdfldrntpvfrddvcfflsqsgetadtlmglryckerga
ltvgitntvgssisretdcgvhinagpeigvastkaytsqfvslvmfalmmcddrismqe
rrkeimlglkrlpdlikevlsmddeiqklatelyhqksvlimgrgyhyatclegalkike
itymhsegilagelkhgplalvdklmpvimiimrdhtyakcqnalqqvvarqgrpvvicd
kedtetikntkrtikvphsvdclqgilsviplqllafhlavlrgydvdfprnlaksvtve

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6svmB (B:)
mcgifaylnyhvprtrreiletlikglqrleyrgydsagvgfdggndkdweanackiqli
kkkgkvkaldeevhkqqdmdldiefdvhlgiahtrwathgepspvnshpqrsdknnefiv
ihngiitnykdlkkfleskgydfesetdtetiaklvkymydnresqdtsfttlverviqq
legafalvfksvhfpgqavgtrrgsplligvrsehklstdhipilyrtgkdkkgscnlsr
vdsttclfpveekaveyyfasdasaviehtnrvifledddvaavvdgrlsihrikrtagh
hhhhhdhpgravqtlqmelqqimkgnfssfmqkeifeqpesvvntmrgrvnfddytvnlg
glkdhikeiqrcrrliliacgtsyhagvatrqvleeltelpvmvelasdfldrntpvfrd
dvcfflsqsgetadtlmglryckergaltvgitntvgssisretdcgvhinagpeigvas
tkaytsqfvslvmfalmmcddrismqerrkeimlglkrlpdlikevlsmddeiqklatel
yhqksvlimgrgyhyatclegalkikeitymhsegilagelkhgplalvdklmpvimiim
rdhtyakcqnalqqvvarqgrpvvicdkedtetikntkrtikvphsvdclqgilsviplq
llafhlavlrgydvdfprnlaksvtve

    Sequence, based on observed residues (ATOM records):
    >6svmB (B:)
cgifaylnyhvprtrreiletlikglqrleyrgydsagvgfdggndkdweanackiqlik
kkgkvkaldeevhkqqdmdldiefdvhlgiahtrwathgepspvnshpqrsdknnefivi
hngiitnykdlkkfleskgydfesetdtetiaklvkymydnresqdtsfttlverviqql
egafalvfksvhfpgqavgtrrgsplligvrsehklstdhipilyrsttclfpveekave
yyfasdasaviehtnrvifledddvaavvdgrlsihrravqtlqmelqqimkgnfssfmq
keifeqpesvvntmrgrvnfddytvnlgglkdhikeiqrcrrliliacgtsyhagvatrq
vleeltelpvmvelasdfldrntpvfrddvcfflsqsgetadtlmglryckergaltvgi
tntvgssisretdcgvhinagpeigvastkaytsqfvslvmfalmmcddrismqerrkei
mlglkrlpdlikevlsmddeiqklatelyhqksvlimgrgyhyatclegalkikeitymh
segilagelkhgplalvdklmpvimiimrdhtyakcqnalqqvvarqgrpvvicdkedte
tikntkrtikvphsvdclqgilsviplqllafhlavlrgydvdfprnlaksvtve