PDB entry 6sud

View 6sud on RCSB PDB site
Description: Structure of L320A mutant of Rex8A from Paenibacillus barcinonensis complexed with xylose.
Class: hydrolase
Keywords: Xylan, Exo-oligoxylanase, Xylanases, Xylooligosaccharides, Xylooligomers, Xylose, Hydrolysis, Polysaccharides, Glycan, Glycan degradation, Xylan degradation, Glycosidase, Hydrolase, Carbohydrate metabolism.
Deposited on 2019-09-13, released 2020-05-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-12-30, with a file datestamp of 2020-12-25.
Experiment type: XRAY
Resolution: 1.74 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Reducing-end xylose-releasing exo-oligoxylanase Rex8A
    Species: Paenibacillus barcinonensis [TaxId:198119]
    Gene: rex8A, DFQ00_11062
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S2UQQ5 (Start-379)
      • engineered mutation (319)
      • expression tag (380-381)
    Domains in SCOPe 2.08: d6suda1, d6suda2
  • Chain 'B':
    Compound: Reducing-end xylose-releasing exo-oligoxylanase Rex8A
    Species: Paenibacillus barcinonensis [TaxId:198119]
    Gene: rex8A, DFQ00_11062
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0S2UQQ5 (Start-379)
      • engineered mutation (319)
      • expression tag (380-381)
    Domains in SCOPe 2.08: d6sudb1, d6sudb2
  • Heterogens: XYP, EDO, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6sudA (A:)
mnitgkgaydtgtyanlfqrsgyredeikarleqtwndlfygdehtriyypvgddkgyml
dtgnddvrsegmsygmmmavqmdkkhefdrlwnyaytymqhtegrykdyfawhckpdgtr
lspgpapdgeeffamalffasnrwgdgpapydyqaqarkilhaclhqgeqgegdpmweps
nrlikfipelpfsdpsyhlphfyelfaqyaneqdrtfwkeaaeasraylrtachpvtgls
peyanydgtpapvqlhgdfrhfysdayrvaanvaldwewfrkdpwqvqqsnriqaffsdi
dvsdyrrytiegepfnepaahpvgllatnamaslaadgpdadsfvkrfwntplrqgkrry
ydnclyfftmlalsgnyrvyqq

    Sequence, based on observed residues (ATOM records): (download) 
    >6sudA (A:)
kgaydtgtyanlfqrsgyredeikarleqtwndlfygdehtriyypvgddkgymldtgnd
dvrsegmsygmmmavqmdkkhefdrlwnyaytymqhtegrykdyfawhckpdgtrlspgp
apdgeeffamalffasnrwgdgpapydyqaqarkilhaclhqgeqgegdpmwepsnrlik
fipelpfsdpsyhlphfyelfaqyaneqdrtfwkeaaeasraylrtachpvtglspeyan
ydgtpapvqlhgdfrhfysdayrvaanvaldwewfrkdpwqvqqsnriqaffsdidvsdy
rrytiegepfnepaahpvgllatnamaslaadgpdadsfvkrfwntplrqgkrryydncl
yfftmlalsgnyrvyqq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6sudB (B:)
mnitgkgaydtgtyanlfqrsgyredeikarleqtwndlfygdehtriyypvgddkgyml
dtgnddvrsegmsygmmmavqmdkkhefdrlwnyaytymqhtegrykdyfawhckpdgtr
lspgpapdgeeffamalffasnrwgdgpapydyqaqarkilhaclhqgeqgegdpmweps
nrlikfipelpfsdpsyhlphfyelfaqyaneqdrtfwkeaaeasraylrtachpvtgls
peyanydgtpapvqlhgdfrhfysdayrvaanvaldwewfrkdpwqvqqsnriqaffsdi
dvsdyrrytiegepfnepaahpvgllatnamaslaadgpdadsfvkrfwntplrqgkrry
ydnclyfftmlalsgnyrvyqq

    Sequence, based on observed residues (ATOM records): (download) 
    >6sudB (B:)
kgaydtgtyanlfqrsgyredeikarleqtwndlfygdehtriyypvgddkgymldtgnd
dvrsegmsygmmmavqmdkkhefdrlwnyaytymqhtegrykdyfawhckpdgtrlspgp
apdgeeffamalffasnrwgdgpapydyqaqarkilhaclhqgeqgegdpmwepsnrlik
fipelpfsdpsyhlphfyelfaqyaneqdrtfwkeaaeasraylrtachpvtglspeyan
ydgtpapvqlhgdfrhfysdayrvaanvaldwewfrkdpwqvqqsnriqaffsdidvsdy
rrytiegepfnepaahpvgllatnamaslaadgpdadsfvkrfwntplrqgkrryydncl
yfftmlalsgnyrvyqq