PDB entry 6sty

View 6sty on RCSB PDB site
Description: human rexo2 exonuclease in complex with rna.
Deposited on 2019-09-12, released 2020-04-29
The last revision was dated 2020-06-10, with a file datestamp of 2020-06-05.
Experiment type: XRAY
Resolution: 3.15 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Oligoribonuclease, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: REXO2, SFN, SMFN, CGI-114
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Oligoribonuclease, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: REXO2, SFN, SMFN, CGI-114
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: RNA (5'-r(p*ap*up*c)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'D':
    Compound: Oligoribonuclease, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: REXO2, SFN, SMFN, CGI-114
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Oligoribonuclease, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: REXO2, SFN, SMFN, CGI-114
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: RNA (5'-r(p*ap*up*c)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6styA (A:)
mlggslgsrllrgvggshgrfgargvreggaamaagesmaqrmvwvdlemtgldiekdqi
iemaclitdsdlnilaegpnliikqpdelldsmsdwckehhgksgltkavkestitlqqa
eyeflsfvrqqtppglcplagnsvhedkkfldkympqfmkhlhyriidvstvkelcrrwy
peeyefapkkaashralddisesikelqfyrnnifkkkidekkrkiiengenektvs

    Sequence, based on observed residues (ATOM records):
    >6styA (A:)
eggaamaagesmaqrmvwvdlemtgldiekdqiiemaclitdsdlnilaegpnliikqpd
elldsmsdwckehhgksgltkavkestitlqqaeyeflsfvrqqtppglcplagnsvhed
kkfldkympqfmkhlhyriidvstvkelcrrwypeeyefapkkashralddisesikelq
fyrnnifkkkiderkiie

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6styB (B:)
mlggslgsrllrgvggshgrfgargvreggaamaagesmaqrmvwvdlemtgldiekdqi
iemaclitdsdlnilaegpnliikqpdelldsmsdwckehhgksgltkavkestitlqqa
eyeflsfvrqqtppglcplagnsvhedkkfldkympqfmkhlhyriidvstvkelcrrwy
peeyefapkkaashralddisesikelqfyrnnifkkkidekkrkiiengenektvs

    Sequence, based on observed residues (ATOM records):
    >6styB (B:)
gaamaagesmaqrmvwvdlemtgldiekdqiiemaclitdsdlnilaegpnliikqpdel
ldsmsdwckehhgksgltkavkestitlqqaeyeflsfvrqqtppglcplagnsvhedkk
fldkympqfmkhlhyriidvstvkelcrrwypeeyefapkkaashralddisesikelqf
yrnnifkkki

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6styD (D:)
mlggslgsrllrgvggshgrfgargvreggaamaagesmaqrmvwvdlemtgldiekdqi
iemaclitdsdlnilaegpnliikqpdelldsmsdwckehhgksgltkavkestitlqqa
eyeflsfvrqqtppglcplagnsvhedkkfldkympqfmkhlhyriidvstvkelcrrwy
peeyefapkkaashralddisesikelqfyrnnifkkkidekkrkiiengenektvs

    Sequence, based on observed residues (ATOM records):
    >6styD (D:)
eggaamaagesmaqrmvwvdlemtgldiekdqiiemaclitdsdlnilaegpnliikqpd
elldsmsdwckehhgksgltkavkestitlqqaeyeflsfvrqqtppglcplagnsvhed
kkfldkympqfmkhlhyriidvstvkelcrrwypeeyefapkkaashralddisesikel
qfyrnnifkkkidrkii

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6styE (E:)
mlggslgsrllrgvggshgrfgargvreggaamaagesmaqrmvwvdlemtgldiekdqi
iemaclitdsdlnilaegpnliikqpdelldsmsdwckehhgksgltkavkestitlqqa
eyeflsfvrqqtppglcplagnsvhedkkfldkympqfmkhlhyriidvstvkelcrrwy
peeyefapkkaashralddisesikelqfyrnnifkkkidekkrkiiengenektvs

    Sequence, based on observed residues (ATOM records):
    >6styE (E:)
aagesmaqrmvwvdlemtgldiekdqiiemaclitdsdlnilaegpnliikqpdelldsm
sdwckehhgksgltkavkestitlqqaeyeflsfvrqqtppglcplagnsvhedkkfldk
ympqfmkhlhyriidvstvkelcrrwypeeyefapkkaalddisesikelqfyrnnifkk
k

  • Chain 'F':
    No sequence available.