PDB entry 6sm7

View 6sm7 on RCSB PDB site
Description: Crystal structure of SLA Reductase YihU from E. Coli
Class: oxidoreductase
Keywords: apo, reductase, sulfoquinovose, dihydroxypropanesulfonate, oxidoreductase
Deposited on 2019-08-21, released 2020-08-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-08-12, with a file datestamp of 2020-08-07.
Experiment type: XRAY
Resolution: 1.88 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-sulfolactaldehyde reductase
    Species: Escherichia coli [TaxId:562]
    Gene: yihU, garR_1, garR_2, garR_3, mmsB, A8C65_00150, AML07_00060, APZ14_22310, AUQ13_20575, AUS26_20040, AW106_21710, BANRA_02548, BANRA_03067, BET08_12475, BHS81_23180, BUE81_09905, BvCms12BK_03464, BvCms2454_03851, BvCmsA75A_01696, BvCmsH15A_04687, BvCmsKSP039_00778, BvCmsNSNP006_03738, BvCmsNSNP036_00183, BvCmsOUP014_01268, BvCmsSINP012_03704, BvCmsSINP036_03005, BvCmsSIP019_01210, BvCmsSIP044_01085, C2U48_13500, C4J69_10130, C5N07_19050, C5P01_22840, CA593_06580, COD30_17900, CV83915_02180, D0X26_17330, D3821_15280, D9I97_17995, D9J11_11940, DIV22_13840, DL800_27080, DNQ41_00720, E2855_04886, E2863_04195, E4Z89_22515, EAI42_02715, EAI52_23825, EC1094V2_4430, EC3234A_72c00280, EC3426_00187, EC95NR1_03333, ED600_18125, EEP23_19010, EKI52_16085, EL75_4302, EL79_4554, EL80_4461, EPS71_08590, EPS97_11270, ERS150876_03348, EXX32_12725, EYD11_22365, FORC28_5901, NCTC10090_02897, NCTC10865_06042, NCTC13462_03726, NCTC8500_05456, NCTC8960_02460, NCTC9037_04932, NCTC9045_05673, NCTC9058_02032, NCTC9062_03294, NCTC9706_02118, RK56_017955, SAMEA3484427_03349, SAMEA3484429_03464, SAMEA3752557_02792, SAMEA3752559_05062, SAMEA3753300_04042, WQ89_24850
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6sm7a1, d6sm7a2
  • Chain 'B':
    Compound: 3-sulfolactaldehyde reductase
    Species: Escherichia coli [TaxId:562]
    Gene: yihU, garR_1, garR_2, garR_3, mmsB, A8C65_00150, AML07_00060, APZ14_22310, AUQ13_20575, AUS26_20040, AW106_21710, BANRA_02548, BANRA_03067, BET08_12475, BHS81_23180, BUE81_09905, BvCms12BK_03464, BvCms2454_03851, BvCmsA75A_01696, BvCmsH15A_04687, BvCmsKSP039_00778, BvCmsNSNP006_03738, BvCmsNSNP036_00183, BvCmsOUP014_01268, BvCmsSINP012_03704, BvCmsSINP036_03005, BvCmsSIP019_01210, BvCmsSIP044_01085, C2U48_13500, C4J69_10130, C5N07_19050, C5P01_22840, CA593_06580, COD30_17900, CV83915_02180, D0X26_17330, D3821_15280, D9I97_17995, D9J11_11940, DIV22_13840, DL800_27080, DNQ41_00720, E2855_04886, E2863_04195, E4Z89_22515, EAI42_02715, EAI52_23825, EC1094V2_4430, EC3234A_72c00280, EC3426_00187, EC95NR1_03333, ED600_18125, EEP23_19010, EKI52_16085, EL75_4302, EL79_4554, EL80_4461, EPS71_08590, EPS97_11270, ERS150876_03348, EXX32_12725, EYD11_22365, FORC28_5901, NCTC10090_02897, NCTC10865_06042, NCTC13462_03726, NCTC8500_05456, NCTC8960_02460, NCTC9037_04932, NCTC9045_05673, NCTC9058_02032, NCTC9062_03294, NCTC9706_02118, RK56_017955, SAMEA3484427_03349, SAMEA3484429_03464, SAMEA3752557_02792, SAMEA3752559_05062, SAMEA3753300_04042, WQ89_24850
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6sm7b1, d6sm7b2
  • Chain 'C':
    Compound: 3-sulfolactaldehyde reductase
    Species: Escherichia coli [TaxId:562]
    Gene: yihU, garR_1, garR_2, garR_3, mmsB, A8C65_00150, AML07_00060, APZ14_22310, AUQ13_20575, AUS26_20040, AW106_21710, BANRA_02548, BANRA_03067, BET08_12475, BHS81_23180, BUE81_09905, BvCms12BK_03464, BvCms2454_03851, BvCmsA75A_01696, BvCmsH15A_04687, BvCmsKSP039_00778, BvCmsNSNP006_03738, BvCmsNSNP036_00183, BvCmsOUP014_01268, BvCmsSINP012_03704, BvCmsSINP036_03005, BvCmsSIP019_01210, BvCmsSIP044_01085, C2U48_13500, C4J69_10130, C5N07_19050, C5P01_22840, CA593_06580, COD30_17900, CV83915_02180, D0X26_17330, D3821_15280, D9I97_17995, D9J11_11940, DIV22_13840, DL800_27080, DNQ41_00720, E2855_04886, E2863_04195, E4Z89_22515, EAI42_02715, EAI52_23825, EC1094V2_4430, EC3234A_72c00280, EC3426_00187, EC95NR1_03333, ED600_18125, EEP23_19010, EKI52_16085, EL75_4302, EL79_4554, EL80_4461, EPS71_08590, EPS97_11270, ERS150876_03348, EXX32_12725, EYD11_22365, FORC28_5901, NCTC10090_02897, NCTC10865_06042, NCTC13462_03726, NCTC8500_05456, NCTC8960_02460, NCTC9037_04932, NCTC9045_05673, NCTC9058_02032, NCTC9062_03294, NCTC9706_02118, RK56_017955, SAMEA3484427_03349, SAMEA3484429_03464, SAMEA3752557_02792, SAMEA3752559_05062, SAMEA3753300_04042, WQ89_24850
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6sm7c1, d6sm7c2
  • Chain 'D':
    Compound: 3-sulfolactaldehyde reductase
    Species: Escherichia coli [TaxId:562]
    Gene: yihU, garR_1, garR_2, garR_3, mmsB, A8C65_00150, AML07_00060, APZ14_22310, AUQ13_20575, AUS26_20040, AW106_21710, BANRA_02548, BANRA_03067, BET08_12475, BHS81_23180, BUE81_09905, BvCms12BK_03464, BvCms2454_03851, BvCmsA75A_01696, BvCmsH15A_04687, BvCmsKSP039_00778, BvCmsNSNP006_03738, BvCmsNSNP036_00183, BvCmsOUP014_01268, BvCmsSINP012_03704, BvCmsSINP036_03005, BvCmsSIP019_01210, BvCmsSIP044_01085, C2U48_13500, C4J69_10130, C5N07_19050, C5P01_22840, CA593_06580, COD30_17900, CV83915_02180, D0X26_17330, D3821_15280, D9I97_17995, D9J11_11940, DIV22_13840, DL800_27080, DNQ41_00720, E2855_04886, E2863_04195, E4Z89_22515, EAI42_02715, EAI52_23825, EC1094V2_4430, EC3234A_72c00280, EC3426_00187, EC95NR1_03333, ED600_18125, EEP23_19010, EKI52_16085, EL75_4302, EL79_4554, EL80_4461, EPS71_08590, EPS97_11270, ERS150876_03348, EXX32_12725, EYD11_22365, FORC28_5901, NCTC10090_02897, NCTC10865_06042, NCTC13462_03726, NCTC8500_05456, NCTC8960_02460, NCTC9037_04932, NCTC9045_05673, NCTC9058_02032, NCTC9062_03294, NCTC9706_02118, RK56_017955, SAMEA3484427_03349, SAMEA3484429_03464, SAMEA3752557_02792, SAMEA3752559_05062, SAMEA3753300_04042, WQ89_24850
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6sm7d1, d6sm7d2
  • Heterogens: BO3, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6sm7A (A:)
maaiafiglgqmgspmasnllqqghqlrvfdvnaeavrhlvdkgatpaanpaqaakdaef
iitmlpngdlvrnvlfgengvceglstdalvidmstihplqtdkliadmqakgfsmmdvp
vgrtsanaitgtllllaggtaeqveratpilmamgselinaggpgmgirvklinnymsia
lnalsaeaavlcealnlpfdvavkvmsgtaagkghfttswpnkvlsgdlspafmidlahk
dlgialdvanqlhvpmplgaasrevysqaraagrgrqdwsaileqvrvsagmtakvkmle
hhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6sm7A (A:)
aaiafiglgqmgspmasnllqqghqlrvfdvnaeavrhlvdkgatpaanpaqaakdaefi
itmlpngdlvrnvlfgengvceglstdalvidmstihplqtdkliadmqakgfsmmdvpv
grtsanaitgtllllaggtaeqveratpilmamgselinaggpgmgirvklinnymsial
nalsaeaavlcealnlpfdvavkvmsgtaagkghfttswpnkvlsgdlspafmidlahkd
lgialdvanqlhvpmplgaasrevysqaraagrgrqdwsaileqvrvsagmtak

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6sm7B (B:)
maaiafiglgqmgspmasnllqqghqlrvfdvnaeavrhlvdkgatpaanpaqaakdaef
iitmlpngdlvrnvlfgengvceglstdalvidmstihplqtdkliadmqakgfsmmdvp
vgrtsanaitgtllllaggtaeqveratpilmamgselinaggpgmgirvklinnymsia
lnalsaeaavlcealnlpfdvavkvmsgtaagkghfttswpnkvlsgdlspafmidlahk
dlgialdvanqlhvpmplgaasrevysqaraagrgrqdwsaileqvrvsagmtakvkmle
hhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6sm7B (B:)
aaiafiglgqmgspmasnllqqghqlrvfdvnaeavrhlvdkgatpaanpaqaakdaefi
itmlpngdlvrnvlfgengvceglstdalvidmstihplqtdkliadmqakgfsmmdvpv
grtsanaitgtllllaggtaeqveratpilmamgselinaggpgmgirvklinnymsial
nalsaeaavlcealnlpfdvavkvmsgtaagkghfttswpnkvlsgdlspafmidlahkd
lgialdvanqlhvpmplgaasrevysqaraagrgrqdwsaileqvrvsagmtakv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6sm7C (C:)
maaiafiglgqmgspmasnllqqghqlrvfdvnaeavrhlvdkgatpaanpaqaakdaef
iitmlpngdlvrnvlfgengvceglstdalvidmstihplqtdkliadmqakgfsmmdvp
vgrtsanaitgtllllaggtaeqveratpilmamgselinaggpgmgirvklinnymsia
lnalsaeaavlcealnlpfdvavkvmsgtaagkghfttswpnkvlsgdlspafmidlahk
dlgialdvanqlhvpmplgaasrevysqaraagrgrqdwsaileqvrvsagmtakvkmle
hhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6sm7C (C:)
aaiafiglgqmgspmasnllqqghqlrvfdvnaeavrhlvdkgatpaanpaqaakdaefi
itmlpngdlvrnvlfgengvceglstdalvidmstihplqtdkliadmqakgfsmmdvpv
grtsanaitgtllllaggtaeqveratpilmamgselinaggpgmgirvklinnymsial
nalsaeaavlcealnlpfdvavkvmsgtaagkghfttswpnkvlsgdlspafmidlahkd
lgialdvanqlhvpmplgaasrevysqaraagrgrqdwsaileqvrvsagmtakv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6sm7D (D:)
maaiafiglgqmgspmasnllqqghqlrvfdvnaeavrhlvdkgatpaanpaqaakdaef
iitmlpngdlvrnvlfgengvceglstdalvidmstihplqtdkliadmqakgfsmmdvp
vgrtsanaitgtllllaggtaeqveratpilmamgselinaggpgmgirvklinnymsia
lnalsaeaavlcealnlpfdvavkvmsgtaagkghfttswpnkvlsgdlspafmidlahk
dlgialdvanqlhvpmplgaasrevysqaraagrgrqdwsaileqvrvsagmtakvkmle
hhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6sm7D (D:)
aaiafiglgqmgspmasnllqqghqlrvfdvnaeavrhlvdkgatpaanpaqaakdaefi
itmlpngdlvrnvlfgengvceglstdalvidmstihplqtdkliadmqakgfsmmdvpv
grtsanaitgtllllaggtaeqveratpilmamgselinaggpgmgirvklinnymsial
nalsaeaavlcealnlpfdvavkvmsgtaagkghfttswpnkvlsgdlspafmidlahkd
lgialdvanqlhvpmplgaasrevysqaraagrgrqdwsaileqvrvsagmtakv