PDB entry 6sjd

View 6sjd on RCSB PDB site
Description: zc3h12b-ribonuclease domain bound to rna
Deposited on 2019-08-13, released 2020-07-22
The last revision was dated 2020-08-19, with a file datestamp of 2020-08-14.
Experiment type: XRAY
Resolution: 3.29 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable ribonuclease ZC3H12B
    Species: Homo sapiens [TaxId:9606]
    Gene: ZC3H12B, CXorf32, MCPIP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Probable ribonuclease ZC3H12B
    Species: Homo sapiens [TaxId:9606]
    Gene: ZC3H12B, CXorf32, MCPIP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: RNA (5'-r(*up*gp*cp*gp*ap*cp*ap*gp*up*cp*gp*gp*up*ap*gp*cp*a)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: MG, CAC, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6sjdA (A:)
dnsdnlrpvvidgsnvamshgnkeefscrgiqlavdwfldkghkditvfvpawrkeqsrp
dapitdqdilrklekekilvftpsrrvqgrrvvcyddrfivklafdsdgiivsndnyrdl
qvekpewkkfieerllmysfvndkfmppddplgrhgpslenflrkrpivpehkkqpcp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6sjdB (B:)
dnsdnlrpvvidgsnvamshgnkeefscrgiqlavdwfldkghkditvfvpawrkeqsrp
dapitdqdilrklekekilvftpsrrvqgrrvvcyddrfivklafdsdgiivsndnyrdl
qvekpewkkfieerllmysfvndkfmppddplgrhgpslenflrkrpivpehkkqpcp

    Sequence, based on observed residues (ATOM records):
    >6sjdB (B:)
nsdnlrpvvidgsnvamshgnkeefscrgiqlavdwfldkghkditvfvpawrkeqsrpd
apitdqdilrklekekilvftpsrrvqgrrvvcyddrfivklafdsdgiivsndnyrdlq
vekpewkkfieerllmysfvndkfmppddplgrhgpslenflrkrpiv

  • Chain 'D':
    No sequence available.