PDB entry 6sjb

View 6sjb on RCSB PDB site
Description: cryo-em structure of the recbcd chi recognised complex
Deposited on 2019-08-13, released 2020-01-01
The last revision was dated 2020-01-22, with a file datestamp of 2020-01-17.
Experiment type: EM
Resolution: 3.7 Å
R-factor: N/A
AEROSPACI score: 0.08 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: RecBCD enzyme subunit RecB
    Species: Escherichia coli [TaxId:562]
    Gene: recB_1, recB, AUQ13_17740, BANRA_01341, BANRA_04284, BHS81_16925, BUE81_06765, BvCms2454_02089, BvCmsHHP001_01116, BvCmsHHP056_02020, BvCmsNSNP006_02180, BvCmsNSNP027_02943, BvCmsSINP011_00475, BvCmsSIP044_01651, C4J69_11455, C5N07_06355, D9I18_10890, DNQ41_19170, E5M00_06020, EAI44_21005, EAI52_16505, EC3234A_49c00050, ECTO6_01026, EFV07_08645, EPS71_15035, ERL57_14525, EXX32_11785, EXX39_20385, EXX71_16045, EYD11_05005, NCTC11022_02903, NCTC13462_04762, NCTC9117_01550, NCTC9706_03254, RG28_07470, SAMEA3472080_03114, SAMEA3752559_02953, SAMEA3753300_01149
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: RecBCD enzyme subunit RecC
    Species: Escherichia coli [TaxId:562]
    Gene: recC, b2822, JW2790
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: RecBCD enzyme subunit RecD
    Species: Escherichia coli [TaxId:562]
    Gene: recD, recD_2, ACU57_24225, AM464_05810, AUQ13_17735, BHS81_16920, BUE81_06770, BvCms2454_02088, BvCmsHHP001_01117, BvCmsHHP056_02019, BvCmsKSP036_04400, BvCmsNSNP006_02181, BvCmsNSNP027_02942, BvCmsSINP011_00476, BvCmsSINP012_00057, BvCmsSIP044_01650, BVL39_12765, C4J69_11460, C5N07_06350, C7B02_19600, CG692_06815, CRM83_26155, D3821_10935, D9G42_05835, D9H94_17780, D9I18_10885, D9K48_23640, DNQ41_19165, E4Z89_04655, EAI44_21010, EC3234A_49c00040, ECTO6_01027, EEP23_14080, EFB45_23490, EL75_0877, EL79_0879, EL80_0882, ERL57_14520, EXX24_12005, EXX32_11780, EXX71_16050, EYD11_05010, EYY78_03865, HW43_18500, NCTC11022_02902, NCTC13148_02729, NCTC8500_01037, NCTC9036_01094, NCTC9037_01202, NCTC9062_02173, NCTC9117_01551, NCTC9706_03255, RG28_07475, RK56_023370, SAMEA3472047_00298, SAMEA3472080_03115, SAMEA3484427_03257, SAMEA3484429_03374, SAMEA3752559_02954, SAMEA3753300_01148, SK85_03061
    Database cross-references and differences (RAF-indexed):
  • Chain 'X':
    Compound: DNA fork substrate
    Species: synthetic construct, synthetic [TaxId:32630]

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6sjbB (B:)
gmsdvaetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveel
lvvtfteaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaer
qmdeaavftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplprei
aqvvfetwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrda
vgeldaliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekfsqrfledrtk
aggetprhplfeaidqllaeplsirdlvitralaeiretvarekrrrgelgfddmlsrld
salrsesgevlaaairtrfpvamidefqdtdpqqyrifrriwhhqpetallligdpkqai
yafrgadiftymkarsevhahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvk
sagknqalrfvfkgetqpamkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeal
lmngddarpvrasdisvlvrsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwl
lqavmtperentlrsalatsmmglnaldietlnndehawdvvveefdgyrqiwrkrgvmp
mlralmsarniaenllataggerrltdilhisellqeagtqlesehalvrwlsqhilepd
snassqqmrlesdkhlvqivtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavld
lnaapesvdlaeaerlaedlrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalg
rllqkgepqdaaglrtciealcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgd
nwrvtsysglqqrghgiaqdlmprldvdaagvasvveeptltphqfprgaspgtflhslf
edldftqpvdpnwvreklelggfesqwepvltewitavlqaplnetgvslsqlsarnkqv
emefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgfidlvfrhegryyll
ayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhriadydyehhfggvi
ylflrgvdkehpqqgiyttrpnaglialmdemfagmtleea

    Sequence, based on observed residues (ATOM records):
    >6sjbB (B:)
aetldplrlplqgerlieasagtgktftiaalylrlllglggsaafprpltveellvvtf
teaataelrgrirsnihelriaclrettdnplyerlleeiddkaqaaqwlllaerqmdea
avftihgfcqrmlnlnafesgmlfeqqliedesllryqacadfwrrhcyplpreiaqvvf
etwkgpqallrdinrylqgeapvikapppddetlasrhaqivaridtvkqqwrdavgeld
aliessgidrrkfnrsnqakwidkisawaeeetnsyqlpeslekftprhplfeaidqlla
eplsirdlvitralaeiretvarekrrrgelgfddmlsrldsalrsesgevlaaairtrf
pvamidefqdtdpqqyrifrriwhhqpetallligdpkqaiyafrgadiftymkarsevh
ahytldtnwrsapgmvnsvnklfsqtddafmfreipfipvksagknqalrfvfkgetqpa
mkmwlmegescgvgdyqstmaqvcaaqirdwlqagqrgeallmngddarpvrasdisvlv
rsrqeaaqvrdaltlleipsvylsnrdsvfetleaqemlwllqavmtperentlrsalat
smmglnaldietlnndehawdvvveefdgyrqiwrkrgvmpmlralmsarniaenllata
ggerrltdilhisellqeagtqlesehalvrwlsqhilepdsnassqqmrlesdkhlvqi
vtihkskgleyplvwlpfitnfrvqeqafyhdrhsfeavldlnaapesvdlaeaerlaed
lrllyvaltrsvwhcslgvaplvrrrgdkkgdtdvhqsalgrllqkgepqdaaglrtcie
alcdddiawqtaqtgdnqpwqvndvstaelnaktlqrlpgdnwrvtsysglqptltphqf
prgaspgtflhslfedldftqpvdpnwvreklelggfesqwepvltewitavlqaplnet
gvslsqlsarnkqvemefylpisepliasqldtlirqfdplsagcpplefmqvrgmlkgf
idlvfrhegryyllayksnwlgedssaytqqamaaamqahrydlqyqlytlalhrylrhr
iadydyehhfggviylflrgvdkehpqqgiyttrpnaglialmdemfag

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6sjbC (C:)
mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaani
dfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsd
krklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlg
qprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllf
tnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpll
aswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsr
sdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsysp
fiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvla
arfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesa
qgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnaffl
pdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvn
ictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylfleal
isaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahl
tclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrf
wahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrr
fraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvq
pdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhyl
sqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegnmm
vrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnqs

    Sequence, based on observed residues (ATOM records):
    >6sjbC (C:)
mlrvyhsnrldvlealmefivererlddpfepemilvqstgmaqwlqmtlsqkfgiaani
dfplpasfiwdmfvrvlpeipkesafnkqsmswklmtllpqlleredftllrhyltddsd
krklfqlsskaadlfdqylvyrpdwlaqwetghlveglgeaqawqaplwkalveythqlg
qprwhranlyqrfietlesattcppglpsrvficgisalppvylqalqalgkhieihllf
tnpcryywgdikdpaylaklltrqrrhsfedrelplfrdsenagqlfnsdgeqdvgnpll
aswgklgrdyiyllsdlessqeldafvdvtpdnllhniqsdilelenravagvnieefsr
sdnkrpldpldssitfhvchspqrevevlhdrllamleedptltprdiivmvadidsysp
fiqavfgsapadrylpyaisdrrarqshpvleafisllslpdsrfvsedvlalldvpvla
arfditeeglrylrqwvnesgirwgidddnvrelelpatgqhtwrfgltrmllgyamesa
qgewqsvlpydessgliaelvghlasllmqlniwrrglaqerpleewlpvcrdmlnaffl
pdaeteaamtlieqqwqaiiaeglgaqygdavplsllrdelaqrldqerisqrflagpvn
ictlmpmrsipfkvvcllgmndgvyprqlaplgfdlmsqkpkrgdrsrrdddrylfleal
isaqqklyisyigrsiqdnserfpsvlvqelidyigqshylpgdealncdesearvkahl
tclhtrmpfdpqnyqpgerqsyarewlpaasqagkahsefvqplpftlpetvpletlqrf
wahpvraffqmrlqvnfrtedseipdtepfileglsryqinqqllnalveqddaerlfrr
fraagdlpygafgeifwetqcqemqqladrviacrqpgqsmeidlacngvqitgwlpqvq
pdgllrwrpsllsvaqgmqlwlehlvycasggngesrlflrkdgewrfpplaaeqalhyl
sqliegyregmsapllvlpesggawlktcydaqndamldddstlqkartkflqayegnmm
vrgegddiwyqrlwrqltpetmeaiveqsqrfllplfrfnq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6sjbD (D:)
mklqkqlleavehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlen
neashpllatcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertva
rffnevnhaievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgkttt
vakllaaliqmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastl
hrllgaqpgsqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdq
lasveagavlgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyr
fgsdsgigqlaaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryld
llqaraepdliiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegr
pvmiarndsalglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvhk
sqgsefdhaalilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsgl
aalfssre

    Sequence, based on observed residues (ATOM records):
    >6sjbD (D:)
avehkqlrpldvqfaltvagdehpavtlaaallshdageghvclplsrlenneashplla
tcvseigelqnweecllasqavsrgdeptpmilcgdrlylnrmwcnertvarffnevnha
ievdeallaqtldklfpvsdeinwqkvaaavaltrrisvisggpgtgktttvakllaali
qmadgercrirlaaptgkaaarlteslgkalrqlpltdeqkkripedastlhrllgaqpg
sqrlrhhagnplhldvlvvdeasmidlpmmsrlidalpdharviflgdrdqlasveagav
lgdicayanagftaerarqlsrltgthvpagtgteaaslrdslcllqksyrfgsdsgigq
laaainrgdktavktvfqqdftdiekrllqsgedyiamleealagygryldllqaraepd
liiqafneyqllcalregpfgvaglnerieqfmqqkrkihrhphsrwyegrpvmiarnds
alglfngdigialdrgqgtrvwfampdgniksvqpsrlpehettwamtvhksqgsefdha
alilpsqrtpvvtrelvytavtrarrrlslyaderilsaaiatrterrsglaalfss

  • Chain 'X':
    No sequence available.