PDB entry 6sgf

View 6sgf on RCSB PDB site
Description: molecular insight into a new low affinity xylan binding module cbm86, from the xylanolytic gut symbiont roseburia intestinalis.
Deposited on 2019-08-04, released 2019-11-20
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.76 Å
R-factor: N/A
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-xylanase
    Species: Roseburia intestinalis L1-82 [TaxId:536231]
    Gene: ROSINTL182_06494
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Beta-xylanase
    Species: Roseburia intestinalis L1-82 [TaxId:536231]
    Gene: ROSINTL182_06494
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Beta-xylanase
    Species: Roseburia intestinalis L1-82 [TaxId:536231]
    Gene: ROSINTL182_06494
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Beta-xylanase
    Species: Roseburia intestinalis L1-82 [TaxId:536231]
    Gene: ROSINTL182_06494
    Database cross-references and differences (RAF-indexed):
    • Uniprot C7G9B5 (3-End)
      • expression tag (2)
  • Chain 'E':
    Compound: Beta-xylanase
    Species: Roseburia intestinalis L1-82 [TaxId:536231]
    Gene: ROSINTL182_06494
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Beta-xylanase
    Species: Roseburia intestinalis L1-82 [TaxId:536231]
    Gene: ROSINTL182_06494
    Database cross-references and differences (RAF-indexed):
  • Heterogens: XYP, CD, CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6sgfA (A:)
gamgvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfq
vadqkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenat
vslvsvtfelkagagdaklgd

    Sequence, based on observed residues (ATOM records):
    >6sgfA (A:)
gvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfqvad
qkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenatvsl
vsvtfelka

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6sgfB (B:)
gamgvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfq
vadqkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenat
vslvsvtfelkagagdaklgd

    Sequence, based on observed residues (ATOM records):
    >6sgfB (B:)
gvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfqvad
qkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenatvsl
vsvtfelkagag

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6sgfC (C:)
gamgvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfq
vadqkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenat
vslvsvtfelkagagdaklgd

    Sequence, based on observed residues (ATOM records):
    >6sgfC (C:)
gvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfqvad
qkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenatvsl
vsvtfelkaga

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6sgfD (D:)
gamgvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfq
vadqkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenat
vslvsvtfelkagagdaklgd

    Sequence, based on observed residues (ATOM records):
    >6sgfD (D:)
mgvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfqva
dqkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenatvs
lvsvtfelkag

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6sgfE (E:)
gamgvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfq
vadqkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenat
vslvsvtfelkagagdaklgd

    Sequence, based on observed residues (ATOM records):
    >6sgfE (E:)
gvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfqvad
qkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenatvsl
vsvtfelkagag

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6sgfF (F:)
gamgvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfq
vadqkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenat
vslvsvtfelkagagdaklgd

    Sequence, based on observed residues (ATOM records):
    >6sgfF (F:)
gvkkvftadqlkvawgdadyeladgqwklsfakqynqvkwtlpesiemsqvnavtfqvad
qkvpislkvynggddataantqyglsgqteytinpsgdgaidavgimitedkpenatvsl
vsvtfelkaga