PDB entry 6sc9

View 6sc9 on RCSB PDB site
Description: dab3/hoip-rbr-hoipin-8
Deposited on 2019-07-23, released 2019-11-27
The last revision was dated 2020-01-29, with a file datestamp of 2020-01-24.
Experiment type: XRAY
Resolution: 2.47 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 ubiquitin-protein ligase RNF31
    Species: Homo sapiens [TaxId:9606]
    Gene: RNF31, ZIBRA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Single Domain Antibody
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6SC9 (0-End)
  • Chain 'C':
    Compound: Single Domain Antibody
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6SC9 (0-119)
  • Heterogens: L68, ZN, SO4, CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6sc9A (A:)
qecavcgwalphnrmqaltscecticpdcfrqhftialkekhitdmvcpacgrpdltddt
qllsyfstldiqlreslepdayalfhkkltegvlmrdpkflwcaqcsfgfiyereqleat
cpqchqtfcvrckrqweeqhrgrscedfqnwkrmndpeyqaqglamylqengidcpkckf
syalarggcmhfhctqcrhqfcsgcynafyaknkcpepncrvkkslhghhprdclfylrd
wtalrlqkllqdnnvmfnteppagaravpgggcrvieqkevpnglrdeacgketpagyag
lcqahykeylvslinahsldpatlyeveeletaterylhvrpqplagedppayqarllqk
lteevplgqsiprrrk

    Sequence, based on observed residues (ATOM records):
    >6sc9A (A:)
qecavcgwalphnrmqaltscecticpdcfrqhftialkekhitdmvcpacgrqllsyfs
tldiqlreslepdayalfhkkltegvlmrdpkflwcaqcsfgfiyereqleatcpqchqt
fcvrckrqweeqhrgrscedfqnwkrmndpeyqaqglamylqengidcpkckfsyalarg
gcmhfhctqcrhqfcsgcynafyaknkcpepncrvkkslhghhprdclfylrdwtalrlq
kllqdnnvmfnteppgcrvieqkevplrdeacgketpagyaglcqahykeylvslinahs
ldpatlyeveeletaterylhvrpqplagedppayqarllqklteevplgqsipr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6sc9B (B:)
evqllesggglvqpggslrlscaasgftfrgysmawvrqapgkglewvstispigtytyy
adsvkgrftisrdnskntlylqmnslraedtavyycakgsysrgtpfdywgqgtlvtvss

    Sequence, based on observed residues (ATOM records):
    >6sc9B (B:)
evqllesggglvqpggslrlscaasgftfrgysmawvrqapgkglewvstispigtytyy
adsvkgrftisrdnskntlylqmnslraedtavyycakgsysrgtpfdywgqgtlvtvs

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6sc9C (C:)
evqllesggglvqpggslrlscaasgftfrgysmawvrqapgkglewvstispigtytyy
adsvkgrftisrdnskntlylqmnslraedtavyycakgsysrgtpfdywgqgtlvtvss