PDB entry 6s9t

View 6s9t on RCSB PDB site
Description: dimerization domain of xenopus laevis ldb1 in complex with darpin 3
Deposited on 2019-07-15, released 2019-10-09
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: lim domain-binding protein 1
    Species: Xenopus laevis [TaxId:8355]
    Gene: ldb1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Darpin 3
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6S9T (Start-164)
  • Heterogens: PG4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6s9tA (A:)
ssggigrhtpygnqtdyrifelnkrlqnwteecdnlwwdaftteffeddamltitfcled
gpkrytigrtlipryfrsifeggatelyyvlkhpkesfhnnfvsldcdqctmvtqhgkpm
ftqvcvegrlylefmfddmmriktwhfsirqhreliprsilamhaqdpqmldqlsknitr
cgls

    Sequence, based on observed residues (ATOM records):
    >6s9tA (A:)
qtdyrifelnkrlqnwteecdnlwwdaftteffeddamltitfcledgpkrytigrtlip
ryfrsifeggatelyyvlkhpkesfhnnfvsldcdqctmvtqhgkpmftqvcvegrlyle
fmfddmmriktwhfsirqhreliprsilamhaqdpqmldqlsknitr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6s9tD (D:)
mrgshhhhhhhhhhggggsypydvpdyalevlfqgpgsdlgkklleaategqddevrilm
angadvnahdrlgstplhlaakmghleivevllktgadvnaedtagytplhlaaawghle
ivevllkhgadvnaqdkfgktpfdlaaifgnediaevlqkaakln

    Sequence, based on observed residues (ATOM records):
    >6s9tD (D:)
sdlgkklleaategqddevrilmangadvnahdrlgstplhlaakmghleivevllktga
dvnaedtagytplhlaaawghleivevllkhgadvnaqdkfgktpfdlaaifgnediaev
lqkaakln