PDB entry 6s6z

View 6s6z on RCSB PDB site
Description: structure of beta-galactosidase from thermotoga maritima
Deposited on 2019-07-04, released 2020-03-18
The last revision was dated 2020-03-18, with a file datestamp of 2020-03-13.
Experiment type: EM
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: beta-galactosidase
    Species: THERMOTOGA MARITIMA MSB8 [TaxId:243274]
    Gene: lacZ, TM_1193
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: beta-galactosidase
    Species: THERMOTOGA MARITIMA MSB8 [TaxId:243274]
    Gene: lacZ, TM_1193
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: beta-galactosidase
    Species: THERMOTOGA MARITIMA MSB8 [TaxId:243274]
    Gene: lacZ, TM_1193
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: beta-galactosidase
    Species: THERMOTOGA MARITIMA MSB8 [TaxId:243274]
    Gene: lacZ, TM_1193
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: beta-galactosidase
    Species: THERMOTOGA MARITIMA MSB8 [TaxId:243274]
    Gene: lacZ, TM_1193
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: beta-galactosidase
    Species: THERMOTOGA MARITIMA MSB8 [TaxId:243274]
    Gene: lacZ, TM_1193
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: beta-galactosidase
    Species: THERMOTOGA MARITIMA MSB8 [TaxId:243274]
    Gene: lacZ, TM_1193
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: beta-galactosidase
    Species: THERMOTOGA MARITIMA MSB8 [TaxId:243274]
    Gene: lacZ, TM_1193
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6s6zA (A:)
pyewenpqlvsegtekshasfipyldpfsgeweypeefislngnwrflfaknpfevpedf
fsekfddsnwdeievpsnwemkgygkpiytnvvypfepnppfvpkddnptgvyrrwieip
edwfkkeiflhfegvrsffylwvngkkigfskdsctpaefrltdvlrpgknlitvevlkw
sdgsyledqdmwwfagiyrdvylyalpkfhirdvfvrtdldenyrngkifldvemrnlge
eeekdlevtlitpdgdektlvketvkpedrvlsfafdvkdpkkwsaetphlyvlklklge
dekkvnfgfrkieikdgtllfngkplyikgvnrhefdpdrghavtvermiqdiklmkqhn
intvrtshypnqtkwydlcdyfglyvideanieshgidwdpevtlanrwewekahfdrik
rmverdknhpsiifwslgneagdgvnfekaalwikkrdntrlihyegttrrgesyyvdvf
slmypkmdilleyaskkrekpfimceyahamgnsvgnlkdywdviekypylhggciwdwv
dqgirkkdengrefwayggdfgdtpndgnfcingvvlpdrtpepelyevkkvyqnvkirq
vskdtyevenrylftnlemfdgawkirkdgevieektfkifaepgekrllkiplpemdds
eyfleisfslsedtpwaekghvvaweqfllkapafekksisdgvslredgkhltveakdt
vyvfskltglleqilhrrkkilkspvvpnfwrvptdndignrmpqrlaiwkraskerklf
kmhwkkeenrvsvhsvfqlpgnswvyttytvfgngdvlvdlslipaedvpeiprigfqft
vpeefgtvewygrgphetywdrkesglfaryrkavgemmhryvrpqetgnrsdvrwfals
dgetklfvsgmpqidfsvwpfsmedlervqhiselperdfvtvnvdfrqmglggddswga
mphleyrllpkpyrfsfrmriseeipswrvlaaipetlhvemssedviregdtlrvkfsl
lndtplskekqvvlfvdgneysvrrvvippfkkeelvfkveglkkgehlihtnlntrkti
yvr

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6s6zB (B:)
pyewenpqlvsegtekshasfipyldpfsgeweypeefislngnwrflfaknpfevpedf
fsekfddsnwdeievpsnwemkgygkpiytnvvypfepnppfvpkddnptgvyrrwieip
edwfkkeiflhfegvrsffylwvngkkigfskdsctpaefrltdvlrpgknlitvevlkw
sdgsyledqdmwwfagiyrdvylyalpkfhirdvfvrtdldenyrngkifldvemrnlge
eeekdlevtlitpdgdektlvketvkpedrvlsfafdvkdpkkwsaetphlyvlklklge
dekkvnfgfrkieikdgtllfngkplyikgvnrhefdpdrghavtvermiqdiklmkqhn
intvrtshypnqtkwydlcdyfglyvideanieshgidwdpevtlanrwewekahfdrik
rmverdknhpsiifwslgneagdgvnfekaalwikkrdntrlihyegttrrgesyyvdvf
slmypkmdilleyaskkrekpfimceyahamgnsvgnlkdywdviekypylhggciwdwv
dqgirkkdengrefwayggdfgdtpndgnfcingvvlpdrtpepelyevkkvyqnvkirq
vskdtyevenrylftnlemfdgawkirkdgevieektfkifaepgekrllkiplpemdds
eyfleisfslsedtpwaekghvvaweqfllkapafekksisdgvslredgkhltveakdt
vyvfskltglleqilhrrkkilkspvvpnfwrvptdndignrmpqrlaiwkraskerklf
kmhwkkeenrvsvhsvfqlpgnswvyttytvfgngdvlvdlslipaedvpeiprigfqft
vpeefgtvewygrgphetywdrkesglfaryrkavgemmhryvrpqetgnrsdvrwfals
dgetklfvsgmpqidfsvwpfsmedlervqhiselperdfvtvnvdfrqmglggddswga
mphleyrllpkpyrfsfrmriseeipswrvlaaipetlhvemssedviregdtlrvkfsl
lndtplskekqvvlfvdgneysvrrvvippfkkeelvfkveglkkgehlihtnlntrkti
yvr

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6s6zC (C:)
pyewenpqlvsegtekshasfipyldpfsgeweypeefislngnwrflfaknpfevpedf
fsekfddsnwdeievpsnwemkgygkpiytnvvypfepnppfvpkddnptgvyrrwieip
edwfkkeiflhfegvrsffylwvngkkigfskdsctpaefrltdvlrpgknlitvevlkw
sdgsyledqdmwwfagiyrdvylyalpkfhirdvfvrtdldenyrngkifldvemrnlge
eeekdlevtlitpdgdektlvketvkpedrvlsfafdvkdpkkwsaetphlyvlklklge
dekkvnfgfrkieikdgtllfngkplyikgvnrhefdpdrghavtvermiqdiklmkqhn
intvrtshypnqtkwydlcdyfglyvideanieshgidwdpevtlanrwewekahfdrik
rmverdknhpsiifwslgneagdgvnfekaalwikkrdntrlihyegttrrgesyyvdvf
slmypkmdilleyaskkrekpfimceyahamgnsvgnlkdywdviekypylhggciwdwv
dqgirkkdengrefwayggdfgdtpndgnfcingvvlpdrtpepelyevkkvyqnvkirq
vskdtyevenrylftnlemfdgawkirkdgevieektfkifaepgekrllkiplpemdds
eyfleisfslsedtpwaekghvvaweqfllkapafekksisdgvslredgkhltveakdt
vyvfskltglleqilhrrkkilkspvvpnfwrvptdndignrmpqrlaiwkraskerklf
kmhwkkeenrvsvhsvfqlpgnswvyttytvfgngdvlvdlslipaedvpeiprigfqft
vpeefgtvewygrgphetywdrkesglfaryrkavgemmhryvrpqetgnrsdvrwfals
dgetklfvsgmpqidfsvwpfsmedlervqhiselperdfvtvnvdfrqmglggddswga
mphleyrllpkpyrfsfrmriseeipswrvlaaipetlhvemssedviregdtlrvkfsl
lndtplskekqvvlfvdgneysvrrvvippfkkeelvfkveglkkgehlihtnlntrkti
yvr

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6s6zD (D:)
pyewenpqlvsegtekshasfipyldpfsgeweypeefislngnwrflfaknpfevpedf
fsekfddsnwdeievpsnwemkgygkpiytnvvypfepnppfvpkddnptgvyrrwieip
edwfkkeiflhfegvrsffylwvngkkigfskdsctpaefrltdvlrpgknlitvevlkw
sdgsyledqdmwwfagiyrdvylyalpkfhirdvfvrtdldenyrngkifldvemrnlge
eeekdlevtlitpdgdektlvketvkpedrvlsfafdvkdpkkwsaetphlyvlklklge
dekkvnfgfrkieikdgtllfngkplyikgvnrhefdpdrghavtvermiqdiklmkqhn
intvrtshypnqtkwydlcdyfglyvideanieshgidwdpevtlanrwewekahfdrik
rmverdknhpsiifwslgneagdgvnfekaalwikkrdntrlihyegttrrgesyyvdvf
slmypkmdilleyaskkrekpfimceyahamgnsvgnlkdywdviekypylhggciwdwv
dqgirkkdengrefwayggdfgdtpndgnfcingvvlpdrtpepelyevkkvyqnvkirq
vskdtyevenrylftnlemfdgawkirkdgevieektfkifaepgekrllkiplpemdds
eyfleisfslsedtpwaekghvvaweqfllkapafekksisdgvslredgkhltveakdt
vyvfskltglleqilhrrkkilkspvvpnfwrvptdndignrmpqrlaiwkraskerklf
kmhwkkeenrvsvhsvfqlpgnswvyttytvfgngdvlvdlslipaedvpeiprigfqft
vpeefgtvewygrgphetywdrkesglfaryrkavgemmhryvrpqetgnrsdvrwfals
dgetklfvsgmpqidfsvwpfsmedlervqhiselperdfvtvnvdfrqmglggddswga
mphleyrllpkpyrfsfrmriseeipswrvlaaipetlhvemssedviregdtlrvkfsl
lndtplskekqvvlfvdgneysvrrvvippfkkeelvfkveglkkgehlihtnlntrkti
yvr

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6s6zE (E:)
pyewenpqlvsegtekshasfipyldpfsgeweypeefislngnwrflfaknpfevpedf
fsekfddsnwdeievpsnwemkgygkpiytnvvypfepnppfvpkddnptgvyrrwieip
edwfkkeiflhfegvrsffylwvngkkigfskdsctpaefrltdvlrpgknlitvevlkw
sdgsyledqdmwwfagiyrdvylyalpkfhirdvfvrtdldenyrngkifldvemrnlge
eeekdlevtlitpdgdektlvketvkpedrvlsfafdvkdpkkwsaetphlyvlklklge
dekkvnfgfrkieikdgtllfngkplyikgvnrhefdpdrghavtvermiqdiklmkqhn
intvrtshypnqtkwydlcdyfglyvideanieshgidwdpevtlanrwewekahfdrik
rmverdknhpsiifwslgneagdgvnfekaalwikkrdntrlihyegttrrgesyyvdvf
slmypkmdilleyaskkrekpfimceyahamgnsvgnlkdywdviekypylhggciwdwv
dqgirkkdengrefwayggdfgdtpndgnfcingvvlpdrtpepelyevkkvyqnvkirq
vskdtyevenrylftnlemfdgawkirkdgevieektfkifaepgekrllkiplpemdds
eyfleisfslsedtpwaekghvvaweqfllkapafekksisdgvslredgkhltveakdt
vyvfskltglleqilhrrkkilkspvvpnfwrvptdndignrmpqrlaiwkraskerklf
kmhwkkeenrvsvhsvfqlpgnswvyttytvfgngdvlvdlslipaedvpeiprigfqft
vpeefgtvewygrgphetywdrkesglfaryrkavgemmhryvrpqetgnrsdvrwfals
dgetklfvsgmpqidfsvwpfsmedlervqhiselperdfvtvnvdfrqmglggddswga
mphleyrllpkpyrfsfrmriseeipswrvlaaipetlhvemssedviregdtlrvkfsl
lndtplskekqvvlfvdgneysvrrvvippfkkeelvfkveglkkgehlihtnlntrkti
yvr

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6s6zF (F:)
pyewenpqlvsegtekshasfipyldpfsgeweypeefislngnwrflfaknpfevpedf
fsekfddsnwdeievpsnwemkgygkpiytnvvypfepnppfvpkddnptgvyrrwieip
edwfkkeiflhfegvrsffylwvngkkigfskdsctpaefrltdvlrpgknlitvevlkw
sdgsyledqdmwwfagiyrdvylyalpkfhirdvfvrtdldenyrngkifldvemrnlge
eeekdlevtlitpdgdektlvketvkpedrvlsfafdvkdpkkwsaetphlyvlklklge
dekkvnfgfrkieikdgtllfngkplyikgvnrhefdpdrghavtvermiqdiklmkqhn
intvrtshypnqtkwydlcdyfglyvideanieshgidwdpevtlanrwewekahfdrik
rmverdknhpsiifwslgneagdgvnfekaalwikkrdntrlihyegttrrgesyyvdvf
slmypkmdilleyaskkrekpfimceyahamgnsvgnlkdywdviekypylhggciwdwv
dqgirkkdengrefwayggdfgdtpndgnfcingvvlpdrtpepelyevkkvyqnvkirq
vskdtyevenrylftnlemfdgawkirkdgevieektfkifaepgekrllkiplpemdds
eyfleisfslsedtpwaekghvvaweqfllkapafekksisdgvslredgkhltveakdt
vyvfskltglleqilhrrkkilkspvvpnfwrvptdndignrmpqrlaiwkraskerklf
kmhwkkeenrvsvhsvfqlpgnswvyttytvfgngdvlvdlslipaedvpeiprigfqft
vpeefgtvewygrgphetywdrkesglfaryrkavgemmhryvrpqetgnrsdvrwfals
dgetklfvsgmpqidfsvwpfsmedlervqhiselperdfvtvnvdfrqmglggddswga
mphleyrllpkpyrfsfrmriseeipswrvlaaipetlhvemssedviregdtlrvkfsl
lndtplskekqvvlfvdgneysvrrvvippfkkeelvfkveglkkgehlihtnlntrkti
yvr

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6s6zG (G:)
pyewenpqlvsegtekshasfipyldpfsgeweypeefislngnwrflfaknpfevpedf
fsekfddsnwdeievpsnwemkgygkpiytnvvypfepnppfvpkddnptgvyrrwieip
edwfkkeiflhfegvrsffylwvngkkigfskdsctpaefrltdvlrpgknlitvevlkw
sdgsyledqdmwwfagiyrdvylyalpkfhirdvfvrtdldenyrngkifldvemrnlge
eeekdlevtlitpdgdektlvketvkpedrvlsfafdvkdpkkwsaetphlyvlklklge
dekkvnfgfrkieikdgtllfngkplyikgvnrhefdpdrghavtvermiqdiklmkqhn
intvrtshypnqtkwydlcdyfglyvideanieshgidwdpevtlanrwewekahfdrik
rmverdknhpsiifwslgneagdgvnfekaalwikkrdntrlihyegttrrgesyyvdvf
slmypkmdilleyaskkrekpfimceyahamgnsvgnlkdywdviekypylhggciwdwv
dqgirkkdengrefwayggdfgdtpndgnfcingvvlpdrtpepelyevkkvyqnvkirq
vskdtyevenrylftnlemfdgawkirkdgevieektfkifaepgekrllkiplpemdds
eyfleisfslsedtpwaekghvvaweqfllkapafekksisdgvslredgkhltveakdt
vyvfskltglleqilhrrkkilkspvvpnfwrvptdndignrmpqrlaiwkraskerklf
kmhwkkeenrvsvhsvfqlpgnswvyttytvfgngdvlvdlslipaedvpeiprigfqft
vpeefgtvewygrgphetywdrkesglfaryrkavgemmhryvrpqetgnrsdvrwfals
dgetklfvsgmpqidfsvwpfsmedlervqhiselperdfvtvnvdfrqmglggddswga
mphleyrllpkpyrfsfrmriseeipswrvlaaipetlhvemssedviregdtlrvkfsl
lndtplskekqvvlfvdgneysvrrvvippfkkeelvfkveglkkgehlihtnlntrkti
yvr

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6s6zH (H:)
pyewenpqlvsegtekshasfipyldpfsgeweypeefislngnwrflfaknpfevpedf
fsekfddsnwdeievpsnwemkgygkpiytnvvypfepnppfvpkddnptgvyrrwieip
edwfkkeiflhfegvrsffylwvngkkigfskdsctpaefrltdvlrpgknlitvevlkw
sdgsyledqdmwwfagiyrdvylyalpkfhirdvfvrtdldenyrngkifldvemrnlge
eeekdlevtlitpdgdektlvketvkpedrvlsfafdvkdpkkwsaetphlyvlklklge
dekkvnfgfrkieikdgtllfngkplyikgvnrhefdpdrghavtvermiqdiklmkqhn
intvrtshypnqtkwydlcdyfglyvideanieshgidwdpevtlanrwewekahfdrik
rmverdknhpsiifwslgneagdgvnfekaalwikkrdntrlihyegttrrgesyyvdvf
slmypkmdilleyaskkrekpfimceyahamgnsvgnlkdywdviekypylhggciwdwv
dqgirkkdengrefwayggdfgdtpndgnfcingvvlpdrtpepelyevkkvyqnvkirq
vskdtyevenrylftnlemfdgawkirkdgevieektfkifaepgekrllkiplpemdds
eyfleisfslsedtpwaekghvvaweqfllkapafekksisdgvslredgkhltveakdt
vyvfskltglleqilhrrkkilkspvvpnfwrvptdndignrmpqrlaiwkraskerklf
kmhwkkeenrvsvhsvfqlpgnswvyttytvfgngdvlvdlslipaedvpeiprigfqft
vpeefgtvewygrgphetywdrkesglfaryrkavgemmhryvrpqetgnrsdvrwfals
dgetklfvsgmpqidfsvwpfsmedlervqhiselperdfvtvnvdfrqmglggddswga
mphleyrllpkpyrfsfrmriseeipswrvlaaipetlhvemssedviregdtlrvkfsl
lndtplskekqvvlfvdgneysvrrvvippfkkeelvfkveglkkgehlihtnlntrkti
yvr