PDB entry 6s6d

View 6s6d on RCSB PDB site
Description: crystal structure of raga-q66l-gtp/ragc-s75n-gdp gtpase heterodimer complex
Deposited on 2019-07-02, released 2019-10-16
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ras-related GTP-binding protein A
    Species: Homo sapiens [TaxId:9606]
    Gene: RRAGA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7L523
      • engineered mutation (65)
  • Chain 'B':
    Compound: Ras-related GTP-binding protein A
    Species: Homo sapiens [TaxId:9606]
    Gene: RRAGA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7L523
      • engineered mutation (65)
  • Chain 'C':
    Compound: Ras-related GTP-binding protein C
    Species: Homo sapiens [TaxId:9606]
    Gene: RRAGC
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9HB90
      • engineered mutation (74)
  • Chain 'D':
    Compound: Ras-related GTP-binding protein C
    Species: Homo sapiens [TaxId:9606]
    Gene: RRAGC
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9HB90
      • engineered mutation (74)
  • Heterogens: GDP, GTP, MG, 9JE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6s6dA (A:)
mpntamkkkvllmgksgsgktsmrsiifanyiardtrrlgatidvehshvrflgnlvlnl
wdcggldtfmenyftsqrdnifrnvevliyvfdvesrelekdmhyyqscleailqnspda
kifclvhkmdlvqedqrdlifkereedlrrlsrplecacfrtsiwdetlykawssivyql
ipnvqqlemnlrnfaqiieadevllferatflvishyqckeqrdvhrfekisniikqfkl
scsklaasfqsmevrnsnfaafidiftsntyvmvvmsdpsipsaatlinirnarkhfekl
ervdgpkhsllmr

    Sequence, based on observed residues (ATOM records):
    >6s6dA (A:)
tamkkkvllmgksgsgktsmrsiifanyiardtrrlgatidvehshvrflgnlvlnlwdc
ggldtfmenyftsqrdnifrnvevliyvfdvesrelekdmhyyqscleailqnspdakif
clvhkmdlvqedqrdlifkereedlrrlsrplecacfrtsiwdetlykawssivyqlipn
vqqlemnlrnfaqiieadevllferatflvishyqckeqrdvhrfekisniikqfklscs
klaasfqsmevrnsnfaafidiftsntyvmvvmsdpsipsaatlinirnarkhfeklerv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6s6dB (B:)
mpntamkkkvllmgksgsgktsmrsiifanyiardtrrlgatidvehshvrflgnlvlnl
wdcggldtfmenyftsqrdnifrnvevliyvfdvesrelekdmhyyqscleailqnspda
kifclvhkmdlvqedqrdlifkereedlrrlsrplecacfrtsiwdetlykawssivyql
ipnvqqlemnlrnfaqiieadevllferatflvishyqckeqrdvhrfekisniikqfkl
scsklaasfqsmevrnsnfaafidiftsntyvmvvmsdpsipsaatlinirnarkhfekl
ervdgpkhsllmr

    Sequence, based on observed residues (ATOM records):
    >6s6dB (B:)
tamkkkvllmgksgsgktsmrsiifanyiardtrrlgatidvehshvrflgnlvlnlwdc
ggldtfmenyftsqrdnifrnvevliyvfdvesrelekdmhyyqscleailqnspdakif
clvhkmdlvqedqrdlifkereedlrrlsrplecacfrtsiwdetlykawssivyqlipn
vqqlemnlrnfaqiieadevllferatflvishyqckeqrdvhrfekisniikqfklscs
klaasfqsmevrnsnfaafidiftsntyvmvvmsdpsipsaatlinirnarkhfeklerv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6s6dC (C:)
mslqygaeetplagsygaadsfpkdfgygveeeeeeaaaagggvgagagggcgpggadss
kprillmglrrsgknsiqkvvfhkmspnetlflestnkiykddisnssfvnfqiwdfpgq
mdffdptfdyemifrgtgaliyvidaqddymealtrlhitvskaykvnpdmnfevfihkv
dglsddhkietqrdihqranddladagleklhlsfyltsiydhsifeafskvvqklipql
ptlenllnifisnsgiekaflfdvvskiyiatdsspvdmqsyelccdmidvvidvsciyg
lkedgsgsaydkesmaiiklnnttvlylkevtkflalvcilreesferkglidynfhcfr
kaihevfevgvtshrscghqtsasslkalthngtprnai

    Sequence, based on observed residues (ATOM records):
    >6s6dC (C:)
sskprillmglrrsgknsiqkvvfhkmspnetlflnssfvnfqiwemifrgtgaliyvid
aqddymealtrlhitvskaykvnpdmnfevfihkvdglsddhkietqrdihqranddlad
agleklhlsfyltsiydhsifeafskvvqklipqlptlenllnifisnsgiekaflfdvv
skiyiatdsspvdmqsyelccdmidvvidvsciyglkedgsgsaydkesmaiiklnnttv
lylkevtkflalvcilreesferkglidynfhcfrkaihevfev

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6s6dD (D:)
mslqygaeetplagsygaadsfpkdfgygveeeeeeaaaagggvgagagggcgpggadss
kprillmglrrsgknsiqkvvfhkmspnetlflestnkiykddisnssfvnfqiwdfpgq
mdffdptfdyemifrgtgaliyvidaqddymealtrlhitvskaykvnpdmnfevfihkv
dglsddhkietqrdihqranddladagleklhlsfyltsiydhsifeafskvvqklipql
ptlenllnifisnsgiekaflfdvvskiyiatdsspvdmqsyelccdmidvvidvsciyg
lkedgsgsaydkesmaiiklnnttvlylkevtkflalvcilreesferkglidynfhcfr
kaihevfevgvtshrscghqtsasslkalthngtprnai

    Sequence, based on observed residues (ATOM records):
    >6s6dD (D:)
skprillmglrrsgknsiqkvvfhnssfvnfqiwemifrgtgaliyvidaqddymealtr
lhitvskaykvnpdmnfevfihkvdglsddhkietqrdihqranddladagleklhlsfy
ltsiydhsifeafskvvqklipqlptlenllnifisnsgiekaflfdvvskiyiatdssp
vdmqsyelccdmidvvidvsciyglkedgsgsaydkesmaiiklnnttvlylkevtkfla
lvcilreesferkglidynfhcfrkaihevfe