PDB entry 6s5u

View 6s5u on RCSB PDB site
Description: strictosidine synthase from ophiorrhiza pumila in complex with n-[2- (1h-indol-3-yl)ethyl]-3-methyl-1-butanamine
Deposited on 2019-07-02, released 2020-04-08
The last revision was dated 2020-04-08, with a file datestamp of 2020-04-03.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Strictosidine synthase
    Species: Ophiorrhiza pumila [TaxId:157934]
    Gene: str
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Strictosidine synthase
    Species: Ophiorrhiza pumila [TaxId:157934]
    Gene: str
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Strictosidine synthase
    Species: Ophiorrhiza pumila [TaxId:157934]
    Gene: str
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Strictosidine synthase
    Species: Ophiorrhiza pumila [TaxId:157934]
    Gene: str
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Strictosidine synthase
    Species: Ophiorrhiza pumila [TaxId:157934]
    Gene: str
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Strictosidine synthase
    Species: Ophiorrhiza pumila [TaxId:157934]
    Gene: str
    Database cross-references and differences (RAF-indexed):
  • Heterogens: KWK, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6s5uA (A:)
masspeffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnn
alcenntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgve
fkwlyalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkgl
nipggtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwv
assdnngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgi
lhnykssvdhhqeknsgglnasfkefssfgs

    Sequence, based on observed residues (ATOM records):
    >6s5uA (A:)
speffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnnalc
enntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgvefkw
lyalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkglnip
ggtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwvass
dnngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgilhn
yk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6s5uB (B:)
masspeffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnn
alcenntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgve
fkwlyalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkgl
nipggtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwv
assdnngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgi
lhnykssvdhhqeknsgglnasfkefssfgs

    Sequence, based on observed residues (ATOM records):
    >6s5uB (B:)
speffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnnalc
enntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgvefkw
lyalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkglnip
ggtevskdgsfvlvgefashrilkywlkpkantsefllkvrgpgnikrtkdgdfwvassd
nngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgilhny

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6s5uC (C:)
masspeffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnn
alcenntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgve
fkwlyalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkgl
nipggtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwv
assdnngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgi
lhnykssvdhhqeknsgglnasfkefssfgs

    Sequence, based on observed residues (ATOM records):
    >6s5uC (C:)
peffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnnalce
nntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgvefkwl
yalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkglnipg
gtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwvassd
nngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgilhny
k

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6s5uD (D:)
masspeffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnn
alcenntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgve
fkwlyalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkgl
nipggtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwv
assdnngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgi
lhnykssvdhhqeknsgglnasfkefssfgs

    Sequence, based on observed residues (ATOM records):
    >6s5uD (D:)
peffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnnalce
nntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgvefkwl
yalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkglnipg
gtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwvassd
nngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgilhny
k

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6s5uE (E:)
masspeffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnn
alcenntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgve
fkwlyalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkgl
nipggtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwv
assdnngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgi
lhnykssvdhhqeknsgglnasfkefssfgs

    Sequence, based on observed residues (ATOM records):
    >6s5uE (E:)
peffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnnalce
nntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgvefkwl
yalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkglnipg
gtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwvassd
nngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgilhny

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6s5uF (F:)
masspeffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnn
alcenntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgve
fkwlyalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkgl
nipggtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwv
assdnngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgi
lhnykssvdhhqeknsgglnasfkefssfgs

    Sequence, based on observed residues (ATOM records):
    >6s5uF (F:)
peffefieapsygpnayafdsdgelyasvedgriikydkpsnkflthavaspiwnnalce
nntnqdlkplcgrvydfgfhyetqrlyiadcyfglgfvgpdgghaiqlatsgdgvefkwl
yalaidqqagfvyvtdvstkyddrgvqdiirindttgrlikydpsteevtvlmkglnipg
gtevskdgsfvlvgefashrilkywlkgpkantsefllkvrgpgnikrtkdgdfwvassd
nngitvtprgirfdefgnilevvaiplpykgehieqvqehdgalfvgslfhefvgilhny
k