PDB entry 6s0b

View 6s0b on RCSB PDB site
Description: crystal structure of properdin in complex with the ctc domain of c3/c3b
Deposited on 2019-06-14, released 2019-09-04
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.31 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: properdin
    Species: Homo sapiens [TaxId:9606]
    Gene: CFP, PFC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P27918 (2-215)
      • expression tag (0-1)
      • expression tag (216-218)
  • Chain 'B':
    Compound: properdin
    Species: Homo sapiens [TaxId:9606]
    Gene: CFP, PFC
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Complement C3
    Species: Homo sapiens [TaxId:9606]
    Gene: C3, CPAMD1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01024 (2-148)
      • expression tag (1)
  • Heterogens: MAN, NAG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6s0bA (A:)
gsvaggwgpwgpvspcpvtcglgqtmeqrtcnhpvpqhggpfcagdatrthicntavpcp
vdgewdswgewspcirrnmksiscqeipgqqsrgrtcrgrkfdghrcagqqqdirhcysi
qhcplkgswsewstwglcmppcgpnptrarqrlctpllpkypptvsmvegqgeknvtfwg
rplprceelqgqklvveekrpclhvpackdpeeeelaaahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6s0bA (A:)
gsvaggwgpwgpvspcpvtcglgqtmeqrtcnhpvpqhggpfcagdatrthicntavpcp
vdgewdswgewspcirrnmksiscqeipgqqsrgrtcrgrkfdghrcagqqqdirhcysi
qhcplkgswsewstwglcmppcgpnptrarqrlctpllpkypptvsmvegqgeknvtfwg
rplprceelqgqklvveekrpclhvpackdpeeeelaaa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6s0bB (B:)
gsdpvlcftqyeessgkckgllgggvsvedcclntafayqkrsgglcqpcrsprwslwst
wapcsvtcsegsqlryrrcvgwngqcsgkvapgtlewqlqacedqqcaaa

    Sequence, based on observed residues (ATOM records):
    >6s0bB (B:)
dpvlcftqyeessgkckgllgggvsvedcclntafayqkrsgglcqpcrsprwslwstwa
pcscsegsqlryrrcvgwngqcsgkvapgtlewqlqacedqqc

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6s0bC (C:)
gsncfiqksddkvtleerldkacepgvdyvyktrlvkvqlsndfdeyimaieqtiksgsd
evqvgqqrtfispikcrealkleekkhylmwglssdfwgekpnlsyiigkdtwvehwpee
decqdeenqkqcqdlgaftesmvvfgcpn

    Sequence, based on observed residues (ATOM records):
    >6s0bC (C:)
sncfiqkdkvtleerldkacepgvdyvyktrlvkvqlsfdeyimaieqtiksgsdevqvg
qqrtfispikcrealkleekkhylmwglssdfwlsyiigkdtwvehwpeedecqdeenqk
qcqdlgaftesmvvfgcpn