PDB entry 6s04

View 6s04 on RCSB PDB site
Description: crystal structure of an inverting family gh156 exosialidase from uncultured bacterium pg7 in complex with n-glycolylneuraminic acid
Deposited on 2019-06-13, released 2019-11-06
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: exosialidase from uncultured bacterium pG7
    Species: uncultured bacterium pG7 [TaxId:2341022]
    Database cross-references and differences (RAF-indexed):
    • PDB 6S04
  • Chain 'B':
    Compound: exosialidase from uncultured bacterium pG7
    Species: uncultured bacterium pG7 [TaxId:2341022]
    Database cross-references and differences (RAF-indexed):
    • PDB 6S04
  • Heterogens: NGE, ACT, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6s04A (A:)
mrpetipgislnednshyfytragrrlsaeevdswvdqyagtqvkelmlcpncmrtsyas
qvwdpiwrgydpagpddqpllaslppeervaargwihtawqlhqdgidiyarwirrcrqr
gispwismrmndvhyvndercflhsefwrenpqlrrvpyrfaewtdrafdygraevrehh
lklirelaarydfdgleldwmrfgfhfrpgyeaegaeiltaftaevrrllddwekrrghk
ihlgaripsrpatalglgmdavtwarrglvdmlvitpfwasaetdmpveiwrqllegtgv
tlaaglevllrpypdsplfqtnsletvrgaaaslldrgaqriylfnymdsqtamedleny
ptllreigsletlagkprrhvltfadtwapgepraiplpatcrpgewrafrlhtgpkpep
geviaalgieggvaigpetlevrvngelcaflglvdlskprpdfpvygfsvplaamrrgy
nlievtarqelrfgwaeflirpwhshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6s04A (A:)
ipgislnednshyfytragrrlsaeevdswvdqyagtqvkelmlcpncmrtsyasqvwdp
iwrgydpagpddqpllaslppeervaargwihtawqlhqdgidiyarwirrcrqrgispw
ismrmndvhyvndercflhsefwrenpqlrrvpyrfaewtdrafdygraevrehhlklir
elaarydfdgleldwmrfgfhfrpgyeaegaeiltaftaevrrllddwekrrghkihlga
ripsrpatalglgmdavtwarrglvdmlvitpfwasaetdmpveiwrqllegtgvtlaag
levllrpypdsplfqtnsletvrgaaaslldrgaqriylfnymdsqtamedlenyptllr
eigsletlagkprrhvltfadtwapgepraiplpatcrpgewrafrlhtgpkpepgevia
algiegaigpetlevrvngelcaflglvdlskprpdfpvygfsvplaamrrgynlievta
rqelrfgwaeflirp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6s04B (B:)
mrpetipgislnednshyfytragrrlsaeevdswvdqyagtqvkelmlcpncmrtsyas
qvwdpiwrgydpagpddqpllaslppeervaargwihtawqlhqdgidiyarwirrcrqr
gispwismrmndvhyvndercflhsefwrenpqlrrvpyrfaewtdrafdygraevrehh
lklirelaarydfdgleldwmrfgfhfrpgyeaegaeiltaftaevrrllddwekrrghk
ihlgaripsrpatalglgmdavtwarrglvdmlvitpfwasaetdmpveiwrqllegtgv
tlaaglevllrpypdsplfqtnsletvrgaaaslldrgaqriylfnymdsqtamedleny
ptllreigsletlagkprrhvltfadtwapgepraiplpatcrpgewrafrlhtgpkpep
geviaalgieggvaigpetlevrvngelcaflglvdlskprpdfpvygfsvplaamrrgy
nlievtarqelrfgwaeflirpwhshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6s04B (B:)
ipgislnednshyfytragrrlsaeevdswvdqyagtqvkelmlcpncmrtsyasqvwdp
iwrgydpagpddqpllaslppeervaargwihtawqlhqdgidiyarwirrcrqrgispw
ismrmndvhyvndercflhsefwrenpqlrrvpyrfaewtdrafdygraevrehhlklir
elaarydfdgleldwmrfgfhfrpgyeaegaeiltaftaevrrllddwekrrghkihlga
ripsrpatalglgmdavtwarrglvdmlvitpfwasaetdmpveiwrqllegtgvtlaag
levllrpypdsplfqtnsletvrgaaaslldrgaqriylfnymdsqtamedlenyptllr
eigsletlagkprrhvltfadtwapgepraiplpatcrpgewrafrlhtgpkpepgevia
algieggvaigpetlevrvngelcaflglvdlskprpdfpvygfsvplaamrrgynliev
tarqelrfgwaeflirp