PDB entry 6rza

View 6rza on RCSB PDB site
Description: cryo-em structure of the human inner arm dynein dnah7 microtubule binding domain bound to microtubules
Deposited on 2019-06-13, released 2019-07-10
The last revision was dated 2019-07-17, with a file datestamp of 2019-07-12.
Experiment type: EM
Resolution: 5.4 Å
R-factor: N/A
AEROSPACI score: -0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tubulin alpha-1B chain
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2XVP4 (0-436)
      • conflict (339)
  • Chain 'B':
    Compound: Tubulin beta chain
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Tubulin alpha-1B chain
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q2XVP4 (0-436)
      • conflict (339)
  • Chain 'D':
    Compound: Tubulin beta chain
    Species: Sus scrofa [TaxId:9823]
    Database cross-references and differences (RAF-indexed):
  • Chain 'X':
    Compound: Cytoplasmic dynein 1 heavy chain 1,Dynein heavy chain 7, axonemal,Cytoplasmic dynein 1 heavy chain 1
    Species: Mus musculus [TaxId:10090]
    Gene: Dync1h1, Dhc1, Dnch1, Dnchc1, Dyhc
    Database cross-references and differences (RAF-indexed):
  • Heterogens: GTP, MG, GDP, TA1

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6rzaA (A:)
mrecisihvgqagvqignacwelyclehgiqpdgqmpsdktigggddsfntffsetgagk
hvpravfvdleptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvld
rirkladqctglqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvsta
vvepynsiltthttlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssita
slrfdgalnvdltefqtnlvpyprihfplatyapvisaekayheqlsvaeitnacfepan
qmvkcdprhgkymaccllyrgdvvpkdvnaaiatiktkrtiqfvdwcptgfkvginyqpp
tvvpggdlakvqravcmlsnttaiaeawarldhkfdlmyakrafvhwyvgegmeegefse
aredmaalekdyeevgv

    Sequence, based on observed residues (ATOM records):
    >6rzaA (A:)
mrecisihvgqagvqignacwelyclehgiqpdgqmsfntffsetgagkhvpravfvdle
ptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvldrirkladqctg
lqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvstavvepynsiltt
httlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssitaslrfdgalnvd
ltefqtnlvpyprihfplatyapvisaekayheqlsvaeitnacfepanqmvkcdprhgk
ymaccllyrgdvvpkdvnaaiatiktkrtiqfvdwcptgfkvginyqpptvvpggdlakv
qravcmlsnttaiaeawarldhkfdlmyakrafvhwyvgegmeegefsearedmaalekd
yeevgv

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6rzaB (B:)
mreivhiqagqcgnqigakfwevisdehgidptgsyhgdsdlqlerinvyyneaagnkyv
prailvdlepgtmdsvrsgpfgqifrpdnfvfgqsgagnnwakghytegaelvdsvldvv
rkesescdclqgfqlthslgggtgsgmgtlliskireeypdrimntfsvvpspkvsdtvv
epynatlsvhqlventdetycidnealydicfrtlklttptygdlnhlvsatmsgvttcl
rfpgqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdaknmm
aacdprhgryltvaavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprg
lkmsatfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvs
eyqqyq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6rzaC (C:)
mrecisihvgqagvqignacwelyclehgiqpdgqmpsdktigggddsfntffsetgagk
hvpravfvdleptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvld
rirkladqctglqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvsta
vvepynsiltthttlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssita
slrfdgalnvdltefqtnlvpyprihfplatyapvisaekayheqlsvaeitnacfepan
qmvkcdprhgkymaccllyrgdvvpkdvnaaiatiktkrtiqfvdwcptgfkvginyqpp
tvvpggdlakvqravcmlsnttaiaeawarldhkfdlmyakrafvhwyvgegmeegefse
aredmaalekdyeevgv

    Sequence, based on observed residues (ATOM records):
    >6rzaC (C:)
mrecisihvgqagvqignacwelyclehgiqpdgqmsfntffsetgagkhvpravfvdle
ptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvldrirkladqctg
lqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvstavvepynsiltt
httlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssitaslrfdgalnvd
ltefqtnlvpyprihfplatyapvisaekayheqlsvaeitnacfepanqmvkcdprhgk
ymaccllyrgdvvpkdvnaaiatiktkrtiqfvdwcptgfkvginyqpptvvpggdlakv
qravcmlsnttaiaeawarldhkfdlmyakrafvhwyvgegmeegefsearedmaalekd
yeevgv

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6rzaD (D:)
mreivhiqagqcgnqigakfwevisdehgidptgsyhgdsdlqlerinvyyneaagnkyv
prailvdlepgtmdsvrsgpfgqifrpdnfvfgqsgagnnwakghytegaelvdsvldvv
rkesescdclqgfqlthslgggtgsgmgtlliskireeypdrimntfsvvpspkvsdtvv
epynatlsvhqlventdetycidnealydicfrtlklttptygdlnhlvsatmsgvttcl
rfpgqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdaknmm
aacdprhgryltvaavfrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprg
lkmsatfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvs
eyqqyq

  • Chain 'X':
    Sequence; same for both SEQRES and ATOM records:
    >6rzaX (X:)
adkqmsvkedldkvepilesalaaldtltaqditvvksmksppagvklvmeaicilkgik
adkipdptgsgkkiedfwgpakrllgdmrflqslheydkdnippaymniirknyipnpdf
vpekirnastaaeglckwviamdsydkvakivaplrnelqkle