PDB entry 6rtr

View 6rtr on RCSB PDB site
Description: piperideine-6-carboxylate dehydrogenase from streptomyces clavuligerus
Deposited on 2019-05-26, released 2019-12-18
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Semialdehyde dehydrogenase Pcd
    Species: Streptomyces clavuligerus ATCC 27064 [TaxId:443255]
    Gene: pcd
    Database cross-references and differences (RAF-indexed):
    • Uniprot O85725
      • engineered mutation (139)
      • engineered mutation (502)
  • Chain 'B':
    Compound: Semialdehyde dehydrogenase Pcd
    Species: Streptomyces clavuligerus ATCC 27064 [TaxId:443255]
    Gene: pcd
    Database cross-references and differences (RAF-indexed):
    • Uniprot O85725
      • engineered mutation (139)
      • engineered mutation (502)
  • Heterogens: SO4, GOL, ACT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6rtrA (A:)
mvtaaisgtdeiraraeqaltrcgvdltavkgdaltartpltgadlfglraqtpedvdra
veaahtafltwrttpapvrgalvkrfgelltehkqdladlvtieagkirsealgevqemi
dicdfavglsrqlygrtmpterpghrlmetwhplgvvgvisafnfpvavwawnaavalvc
gdtvvwkpseltpltalacaalldlaiadagapkglnqvvvgaadvgerlvdsprvplvs
atgstrmgravgprvaarfgrtilelggnnaavvtpsadldltvnaavfaaagtagqrct
tlrrlivhediadtvverltaaferlpigdpfqdttlvgplvneaafgrmreaveratae
ggtlcaggerqfpdaapgayyvrpalvrmpaqtavvreetfapilyvltyrdldeairln
nevpqglsagiftadqseaerflapdgadcgianvnigtsgaeiggafggeketgggres
gsdawraymrratntvnysgrvtlaqgvdfsq

    Sequence, based on observed residues (ATOM records):
    >6rtrA (A:)
vtaaisgtdeiraraeqaltrcgvdltavkgdaltartpltgadlfglraqtpedvdrav
eaahtafltwrttpapvrgalvkrfgelltehkqdladlvtieagkirsealgevqemid
icdfavglsrqlygrtmpterpghrlmetwhplgvvgvisafnfpvavwawnaavalvcg
dtvvwkpseltpltalacaalldlaiadagapkglnqvvvgaadvgerlvdsprvplvsa
tgravgprvaarfgrtilelggnnaavvtpsadldltvnaavfaaagtagqrcttlrrli
vhediadtvverltaaferlpigdpfqdttlvgplvneaafgrmreaverataeggtlca
ggerqfpdaapgayyvrpalvrmpaqtavvreetfapilyvltyrdldeairlnnevpqg
lsagiftadqseaerflapdgadcgianvnigtsgaeiggafggeketgggresgsdawr
aymrratntvnysgrvtlaqgvdfs

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6rtrB (B:)
mvtaaisgtdeiraraeqaltrcgvdltavkgdaltartpltgadlfglraqtpedvdra
veaahtafltwrttpapvrgalvkrfgelltehkqdladlvtieagkirsealgevqemi
dicdfavglsrqlygrtmpterpghrlmetwhplgvvgvisafnfpvavwawnaavalvc
gdtvvwkpseltpltalacaalldlaiadagapkglnqvvvgaadvgerlvdsprvplvs
atgstrmgravgprvaarfgrtilelggnnaavvtpsadldltvnaavfaaagtagqrct
tlrrlivhediadtvverltaaferlpigdpfqdttlvgplvneaafgrmreaveratae
ggtlcaggerqfpdaapgayyvrpalvrmpaqtavvreetfapilyvltyrdldeairln
nevpqglsagiftadqseaerflapdgadcgianvnigtsgaeiggafggeketgggres
gsdawraymrratntvnysgrvtlaqgvdfsq

    Sequence, based on observed residues (ATOM records):
    >6rtrB (B:)
aisgtdeiraraeqaltrcgvdltavkgdaltartpltgadlfglraqtpedvdraveaa
htafltwrttpapvrgalvkrfgelltehkqdladlvtieagkirsealgevqemidicd
favglsrqlygrtmpterpghrlmetwhplgvvgvisafnfpvavwawnaavalvcgdtv
vwkpseltpltalacaalldlaiadagapkglnqvvvgaadvgerlvdsprvplvsatgr
avgprvaarfgrtilelggnnaavvtpsadldltvnaavfaaagtagqrcttlrrlivhe
diadtvverltaaferlpigdpfqdttlvgplvneaafgrmreaverataeggtlcagge
rqfpdaapgayyvrpalvrmpaqtavvreetfapilyvltyrdldeairlnnevpqglsa
giftadqseaerflapdgadcgianvnigtsgaeiggafggeketgggresgsdawraym
rratntvnysgrvtla