PDB entry 6roj

View 6roj on RCSB PDB site
Description: cryo-em structure of the activated drs2p-cdc50p
Deposited on 2019-05-13, released 2019-07-03
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: EM
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable phospholipid-transporting ATPase DRS2,Oxaloacetate decarboxylase alpha chain
    Species: Klebsiella pneumoniae [TaxId:573]
    Gene: oadA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Cell division control protein 50
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: CDC50, YCR094W, YCR94W
    Database cross-references and differences (RAF-indexed):
  • Heterogens: 2Y5, BFD, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6rojA (A:)
    mnddretppkrkpgeddtlfdidflddttshsgsrskvtnshananyippshvlpeetid
    ldadddniendvhenlfmsnnhddqtswnanrfdsdayqpqslravkppglfarfgnglk
    naftfkrkkgpesfemnhynavtnnelddnyldsrnkfnikilfnryilrknvgdaegng
    eprvihindslanssfgysdnhisttkynfatflpkflfqefskyanlfflctsaiqqvp
    hvsptnryttigtllvvlivsamkeciedikransdkelnnstaeifseahddfvekrwi
    dirvgdiirvkseepipadtiilsssepeglcyietanldgetnlkikqsrvetakfidv
    ktlknmngkvvseqpnsslytyegtmtlndrqiplspdqmilrgatlrntawifglvift
    ghetkllrnatatpikrtavekiinrqiialftvlivlilissignvimstadakhlsyl
    ylegtnkaglffkdfltfwilfsnlvpislfvtvelikyyqafmigsdldlyyektdtpt
    vvrtsslveelgqieyifsdktgtltrnimefkscsiaghcyidkipedktatvedgiev
    gyrkfddlkkklndpsdedspiindfltllatchtvipefqsdgsikyqaaspdegalvq
    ggadlgykfiirkpnsvtvlleetgeekeyqllnicefnstrkrmsaifrfpdgsiklfc
    kgadtvilerlddeanqyveatmrhledyaseglrtlclamrdisegeyeewnsiyneaa
    ttldnraekldeaanlieknliligataiedklqdgvpetihtlqeagikiwvltgdrqe
    tainigmscrllsedmnlliineetrddternllekinalnehqlsthdmntlalvidgk
    slgfalepeledylltvaklckaviccrvsplqkalvvkmvkrkssslllaigdgandvs
    miqaahvgvgisgmegmqaarsadiavgqfkflkklllvhgswsyqrisvailysfyknt
    alymtqfwyvfanafsgqsimeswtmsfynlfftvwppfvigvfdqfvssrllerypqly
    klgqkgqffsvyifwgwiingffhsaivfigtiliyrygfalnmhgeladhwswgvtvyt
    tsviivlgkaalvtnqwtkftliaipgsllfwliffpiyasifphanisreyygvvkhty
    gsgvfwltlivlpifalvrdflwkyykrmyepetyhviqemqkynislvprgsdsrphvq
    qfqnairkvrqvqrmkkqrgfafsqaeeggqekivrmydttqkrgkygelqdasanpfnd
    nnglgsndfesaepfienpfadgnqnsnrfsssrddisfdigggglvprgsggtaaapgp
    apapapasapaaaapagagtpvtaplagtiwkvlasegqtvaagevllileamkmeteir
    aaqagtvrgiavkagdavavgdtlm
    

    Sequence, based on observed residues (ATOM records):
    >6rojA (A:)
    prvihindslanssfgysdnhisttkynfatflpkflfqefskyanlfflctsaiqqvph
    vsptnryttigtllvvlivsamkeciedikransdkelnnstaeifseahddfvekrwid
    irvgdiirvkseepipadtiilsssepeglcyietanldgetnlkikqsrvetakfidvk
    tlknmngkvvseqpnsslytyegtmtlndrqiplspdqmilrgatlrntawifglviftg
    hetkllrnatatpikrtavekiinrqiialftvlivlilissignvimstadakhlsyly
    legtnkaglffkdfltfwilfsnlvpislfvtvelikyyqafmigsdldlyyektdtptv
    vrtsslveelgqieyifsdktgtltrnimefkscsiaghcyidkipedktatvedgievg
    yrkfddlkkklndpsdedspiindfltllatchtvipefqsdgsikyqaaspdegalvqg
    gadlgykfiirkpnsvtvlleetgeekeyqllnicefnstrkrmsaifrfpdgsiklfck
    gadtvilerlddeanqyveatmrhledyaseglrtlclamrdisegeyeewnsiyneaat
    tldnraekldeaanlieknliligataiedklqdgvpetihtlqeagikiwvltgdrqet
    ainigmscrllsedmnlliineetrddternllekinalnehqlsthdmntlalvidgks
    lgfalepeledylltvaklckaviccrvsplqkalvvkmvkrkssslllaigdgandvsm
    iqaahvgvgisgmegmqaarsadiavgqfkflkklllvhgswsyqrisvailysfyknta
    lymtqfwyvfanafsgqsimeswtmsfynlfftvwppfvigvfdqfvssrllerypqlyk
    lgqkgqffsvyifwgwiingffhsaivfigtiliyrygfalnmhgeladhwswgvtvytt
    sviivlgkaalvtnqwtkftliaipgsllfwliffpiyasifphanisreyygvvkhtyg
    sgvfwltlivlpifalvrdflwkyykrmyepetyhviqemqkyn
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6rojC (C:)
    mvslfkrgkappltkegptskkppntafrqqrlkawqpilspqsvlpllifvaciftpig
    iglivsatkvqdltidyshcdtkasttafedipkkyikyhfkskvenkpqwrltenenge
    qscelqfeipndikksifiyykitnfyqnhrryvqsfdtkqilgepikkddldtscspir
    sredkiiypcgliansmfndtfsqvlsgiddtedynltnkhiswsidrhrfkttkynasd
    ivpppnwmkkypdgytdenlpdihtweefqvwmrtaafpkfykltlknesaslpkgkyqm
    nielnypislfggtksfvlttngaiggrnmslgvlylivaglcalfgiiflvklifqpra
    mgdhtylnfddeenedyedvhaenttlreilgggglvprgsgghhhhhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6rojC (C:)
    tskkppntafrqqrlkawqpilspqsvlpllifvaciftpigiglivsatkvqdltidys
    hcdtkasttafedipkkyikyhfkskvenkpqwrltenengeqscelqfeipndikksif
    iyykitnfyqnhrryvqsfdtkqilgepikkddldtscspirsredkiiypcgliansmf
    ndtfsqvlsgiddtedynltnkhiswsidrhrfkttkynasdivpppnwmkkypdgytde
    nlpdihtweefqvwmrtaafpkfykltlknesaslpkgkyqmnielnypislfggtksfv
    lttngaiggrnmslgvlylivaglcalfgiiflvklifqp