PDB entry 6ro6

View 6ro6 on RCSB PDB site
Description: crystal structure of the c-terminal dimerization domain of the essential repressor ddro from radiation-resistant deinococcus bacteria (deinococcus deserti)
Deposited on 2019-05-10, released 2019-10-09
The last revision was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 1.41 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HTH-type transcriptional regulator DdrOC
    Species: deinococcus deserti [TaxId:310783]
    Gene: ddrOC, Deide_20570
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: HTH-type transcriptional regulator DdrOC
    Species: deinococcus deserti [TaxId:310783]
    Gene: ddrOC, Deide_20570
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: HTH-type transcriptional regulator DdrOC
    Species: deinococcus deserti [TaxId:310783]
    Gene: ddrOC, Deide_20570
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: HTH-type transcriptional regulator DdrOC
    Species: deinococcus deserti [TaxId:310783]
    Gene: ddrOC, Deide_20570
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: HTH-type transcriptional regulator DdrOC
    Species: deinococcus deserti [TaxId:310783]
    Gene: ddrOC, Deide_20570
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: HTH-type transcriptional regulator DdrOC
    Species: deinococcus deserti [TaxId:310783]
    Gene: ddrOC, Deide_20570
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: HTH-type transcriptional regulator DdrOC
    Species: deinococcus deserti [TaxId:310783]
    Gene: ddrOC, Deide_20570
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: HTH-type transcriptional regulator DdrOC
    Species: deinococcus deserti [TaxId:310783]
    Gene: ddrOC, Deide_20570
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ro6A (A:)
megalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

    Sequence, based on observed residues (ATOM records):
    >6ro6A (A:)
egalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ro6B (B:)
megalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

    Sequence, based on observed residues (ATOM records):
    >6ro6B (B:)
egalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ro6C (C:)
megalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

    Sequence, based on observed residues (ATOM records):
    >6ro6C (C:)
galpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ro6D (D:)
megalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

    Sequence, based on observed residues (ATOM records):
    >6ro6D (D:)
galpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ro6E (E:)
megalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

    Sequence, based on observed residues (ATOM records):
    >6ro6E (E:)
galpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkril

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ro6F (F:)
megalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

    Sequence, based on observed residues (ATOM records):
    >6ro6F (F:)
lpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkril

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6ro6G (G:)
megalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

    Sequence, based on observed residues (ATOM records):
    >6ro6G (G:)
alpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6ro6H (H:)
megalpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils

    Sequence, based on observed residues (ATOM records):
    >6ro6H (H:)
alpkglsdliadptlgpqitpdwvrtlsrielrgkrprdkqdwyeiylhlkrils