PDB entry 6rmj

View 6rmj on RCSB PDB site
Description: Crystal structure of human NGR-TNF
Class: cytokine
Keywords: TNF ALPHA, TNFA, Cytokine, Immune system
Deposited on 2019-05-07, released 2019-10-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-09, with a file datestamp of 2019-10-04.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tumor necrosis factor
    Species: Homo sapiens [TaxId:9606]
    Gene: TNF, TNFA, TNFSF2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rmja_
  • Chain 'B':
    Compound: Tumor necrosis factor
    Species: Homo sapiens [TaxId:9606]
    Gene: TNF, TNFA, TNFSF2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rmjb_
  • Chain 'C':
    Compound: Tumor necrosis factor
    Species: Homo sapiens [TaxId:9606]
    Gene: TNF, TNFA, TNFSF2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rmjc_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6rmjA (A:)
cngrcgvrsssrtpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseg
lyliysqvlfkgqgcpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpw
yepiylggvfqlekgdrlsaeinrpdyldfaesgqvyfgiial

    Sequence, based on observed residues (ATOM records): (download) 
    >6rmjA (A:)
sdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqg
cpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqlek
gdrlsaeinrpdyldfaesgqvyfgiial

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6rmjB (B:)
cngrcgvrsssrtpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseg
lyliysqvlfkgqgcpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpw
yepiylggvfqlekgdrlsaeinrpdyldfaesgqvyfgiial

    Sequence, based on observed residues (ATOM records): (download) 
    >6rmjB (B:)
sdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqg
cpsthvllthtisriavsyqtkvnllsaikspcqretpeeakpwyepiylggvfqlekgd
rlsaeinrpdyldfaesgqvyfgiial

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6rmjC (C:)
cngrcgvrsssrtpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseg
lyliysqvlfkgqgcpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpw
yepiylggvfqlekgdrlsaeinrpdyldfaesgqvyfgiial

    Sequence, based on observed residues (ATOM records): (download) 
    >6rmjC (C:)
sdkpvahvvanpqaegqlqwlnrllangvelrdnqlvvpseglyliysqvlfkgqgcpst
hvllthtisriavsyqtkvnllsaikspcqretakpwyepiylggvfqlekgdrlsaein
rpdyldfaesgqvyfgiial