PDB entry 6rmf

View 6rmf on RCSB PDB site
Description: Crystal structure of NDM-1 with VNRX-5133
Class: antimicrobial protein
Keywords: metallo-beta-lactamase, antibiotic resistance, inhibitor, ANTIMICROBIAL PROTEIN
Deposited on 2019-05-06, released 2019-09-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-09-11, with a file datestamp of 2019-09-06.
Experiment type: XRAY
Resolution: 1.51 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Metallo-beta-lactamase type 2
    Species: Klebsiella pneumoniae [TaxId:573]
    Gene: blaNDM-1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6rmfa_
  • Chain 'B':
    Compound: Metallo-beta-lactamase type 2
    Species: Klebsiella pneumoniae [TaxId:573]
    Gene: blaNDM-1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6rmfb_
  • Heterogens: K9B, K9K, ZN, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6rmfA (A:)
gsgeirptigqqmetgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrv
lvvdtawtddqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsn
qlapqegmvaaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafg
gclikdskakslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarma
dklr

    Sequence, based on observed residues (ATOM records): (download) 
    >6rmfA (A:)
ptigqqmetgdqrfgdlvfrqlapnvwqhtsyldgavasnglivrdggrvlvvdtawtdd
qtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqegmva
aqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskak
slgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarmadklr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6rmfB (B:)
gsgeirptigqqmetgdqrfgdlvfrqlapnvwqhtsyldmpgfgavasnglivrdggrv
lvvdtawtddqtaqilnwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsn
qlapqegmvaaqhsltfaangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafg
gclikdskakslgnlgdadtehyaasarafgaafpkasmivmshsapdsraaithtarma
dklr

    Sequence, based on observed residues (ATOM records): (download) 
    >6rmfB (B:)
etgdqrfgdlvfrqlapnvwqhtsyldmgavasnglivrdggrvlvvdtawtddqtaqil
nwikqeinlpvalavvthahqdkmggmdalhaagiatyanalsnqlapqegmvaaqhslt
faangwvepatapnfgplkvfypgpghtsdnitvgidgtdiafggclikdskakslgnlg
dadtehyaasarafgaafpkasmivmshsapdsraaithtarmadklr