PDB entry 6rlq

View 6rlq on RCSB PDB site
Description: crystal structure of the human prmt5:mep50 complex with jnj45031882
Deposited on 2019-05-02, released 2020-07-15
The last revision was dated 2020-07-15, with a file datestamp of 2020-07-10.
Experiment type: XRAY
Resolution: 2.53 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein arginine N-methyltransferase 5
    Species: Homo sapiens [TaxId:9606]
    Gene: PRMT5, HRMT1L5, IBP72, JBP1, SKB1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Methylosome protein 50
    Species: Homo sapiens [TaxId:9606]
    Gene: WDR77, MEP50, WD45, HKMT1069, Nbla10071
    Database cross-references and differences (RAF-indexed):
  • Heterogens: K8N, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6rlqA (A:)
    dykddddkaamavggaggsrvssgrdlncvpeiadtlgavakqgfdflcmpvfhprfkre
    fiqepaknrpgpqtrsdlllsgrdwntlivgklspwirpdskvekirrnseaamlqelnf
    gaylglpafllplnqedntnlarvltnhihtghhssmfwmrvplvapedlrddiienapt
    thteeysgeektwmwwhnfrtlcdyskriavaleigadlpsnhvidrwlgepikaailpt
    sifltnkkgfpvlskmhqrlifrllklevqfiitgtnhhsekefcsylqyleylsqnrpp
    pnayelfakgyedylqsplqplmdnlesqtyevfekdpikysqyqqaiykclldrvpeee
    kdtnvqvlmvlgagrgplvnaslraakqadrriklyaveknpnavvtlenwqfeewgsqv
    tvvssdmrewvapekadiivsellgsfadnelspecldgaqhflkddgvsipgeytsfla
    pisssklynevracrekdrdpeaqfempyvvrlhnfhqlsapqpcftfshpnrdpmidnn
    ryctlefpvevntvlhgfagyfetvlyqditlsirpethspgmfswfpilfpikqpitvr
    egqticvrfwrcsnskkvwyewavtapvcsaihnptgrsytigl
    

    Sequence, based on observed residues (ATOM records):
    >6rlqA (A:)
    rvssgrdlncvpeiadtlgavakqgfdflcmpvfhprfkrefiqepaknrpgpqtrsdll
    lsgrdwntlivgklspwirpdskvekirrnseaamlqelnfgaylglpafllplnqednt
    nlarvltnhihtghhssmfwmrvplvapedlrddiienaptthteeysgeektwmwwhnf
    rtlcdyskriavaleigadlpsnhvidrwlgepikaailptsifltnkkgfpvlskmhqr
    lifrllklevqfiitgtnhhsekefcsylqyleylsqnrpppnayelfakgyedylqspl
    qplmdnlesqtyevfekdpikysqyqqaiykclldrvpeeekdtnvqvlmvlgagrgplv
    naslraakqadrriklyaveknpnavvtlenwqfeewgsqvtvvssdmrewvapekadii
    vsellgsfadnelspecldgaqhflkddgvsipgeytsflapisssklynevracrekdr
    dpeaqfempyvvrlhnfhqlsapqpcftfshpnrdpmidnnryctlefpvevntvlhgfa
    gyfetvlyqditlsirpethspgmfswfpilfpikqpitvregqticvrfwrcsnskkvw
    yewavtapvcsaihnptgrsytigl
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6rlqB (B:)
    mhhhhhhrketppplvppaarewnlppnapacmerqleaaryrsdgalllgasslsgrcw
    agslwlfkdpcaapnegfcsagvqteagvadltwvgergilvasdsgavelweldenetl
    ivskfckyehddivstvsvlssgtqavsgskdicikvwdlaqqvvlssyrahaaqvtcva
    asphkdsvflscsednrillwdtrcpkpasqigcsapgylptslawhpqqsevfvfgden
    gtvslvdtkstscvlssavhsqcvtglvfsphsvpflaslsedcslavldsslselfrsq
    ahrdfvrdatwsplnhsllttvgwdhqvvhhvvpteplpapgpasvte
    

    Sequence, based on observed residues (ATOM records):
    >6rlqB (B:)
    pnapacmerqleaaryrsdgalllgasslsgrcwagslwlfkdpcaapnegfcsagvqte
    agvadltwvgergilvasdsgavelweldenetlivskfckyehddivstvsvlssgtqa
    vsgskdicikvwdlaqqvvlssyrahaaqvtcvaasphkdsvflscsednrillwdtrcp
    kpasqiggylptslawhpqqsevfvfgdengtvslvdtkscvlssavhsqcvtglvfsph
    svpflaslsedcslavldsslselfrsqahrdfvrdatwsplnhsllttvgwdhqvvhhv
    vpt