PDB entry 6rk6

View 6rk6 on RCSB PDB site
Description: characterization of an intertidal zone metagenome oligoribonuclease and the role of the intermolecular disulfide bond for homodimer formation and nuclease activity.
Deposited on 2019-04-30, released 2019-08-28
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: XRAY
Resolution: 3.15 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Oligoribonuclease
    Species: metagenome [TaxId:256318]
    Gene: ORN
    Database cross-references and differences (RAF-indexed):
    • PDB 6RK6
  • Chain 'B':
    Compound: Oligoribonuclease
    Species: metagenome [TaxId:256318]
    Gene: ORN
    Database cross-references and differences (RAF-indexed):
    • PDB 6RK6
  • Chain 'C':
    Compound: Oligoribonuclease
    Species: metagenome [TaxId:256318]
    Gene: ORN
    Database cross-references and differences (RAF-indexed):
    • PDB 6RK6
  • Heterogens: MN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6rk6A (A:)
vpqnpnvlvwmdlemtgldpekdriiematiitdgdlrtiaegpvivihqkqelidgmde
wntrthnktglvtkvktsrvterqaeietldfiqrhtlknraplcgnsicqdrrflykym
pelsewlhyrnvdvssfkevarhwapsilsgfekrashqalddikesieelryyrnnlil
ldmn

    Sequence, based on observed residues (ATOM records):
    >6rk6A (A:)
pnvlvwmdlemtgldpekdriiematiitdgdlrtiaegpvivihqkqelidgmdewntr
thnktglvtkvktsrvterqaeietldfiqrhtlknraplcgnsicqdrrflykympels
ewlhyrnvdvssfkevarhwapsilsgfekrashqalddikesieelryyrnnlill

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6rk6B (B:)
vpqnpnvlvwmdlemtgldpekdriiematiitdgdlrtiaegpvivihqkqelidgmde
wntrthnktglvtkvktsrvterqaeietldfiqrhtlknraplcgnsicqdrrflykym
pelsewlhyrnvdvssfkevarhwapsilsgfekrashqalddikesieelryyrnnlil
ldmn

    Sequence, based on observed residues (ATOM records):
    >6rk6B (B:)
pnvlvwmdlemtgldpekdriiematiitdgdlrtiaegpvivihqkqelidgmdewntr
thnktglvtkvktsrvterqaeietldfiqrhtlknraplcgnsicqdrrflykympels
ewlhyrnvdvssfkevarhwapsilsgfekrashqalddikesieelryyrnnlill

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6rk6C (C:)
vpqnpnvlvwmdlemtgldpekdriiematiitdgdlrtiaegpvivihqkqelidgmde
wntrthnktglvtkvktsrvterqaeietldfiqrhtlknraplcgnsicqdrrflykym
pelsewlhyrnvdvssfkevarhwapsilsgfekrashqalddikesieelryyrnnlil
ldmn

    Sequence, based on observed residues (ATOM records):
    >6rk6C (C:)
pnvlvwmdlemtgldpekdriiematiitdgdlrtiaegpvivihqkqelidgmdewntr
thnktglvtkvktsrvterqaeietldfiqrhtlknraplcgnsicqdrrflykympels
ewlhyrnvdvssfkevarhwapsilsgfekrashqalddikesieelryyrnnlilld