PDB entry 6rk2

View 6rk2 on RCSB PDB site
Description: Complex structure of virulence factor SghA mutant with its substrate SAG
Class: hydrolase
Keywords: Chemical signaling, Sucrose, Agrobacterium, Host-pathogen interaction, Glucosidase, HYDROLASE
Deposited on 2019-04-30, released 2019-10-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.09 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-glucosidase
    Species: Agrobacterium tumefaciens A6 [TaxId:1453998]
    Gene: sghA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rk2a_
  • Chain 'B':
    Compound: Beta-glucosidase
    Species: Agrobacterium tumefaciens A6 [TaxId:1453998]
    Gene: sghA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rk2b_
  • Heterogens: 6GR, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6rk2A (A:)
mgsshhhhhhssglvprgshmlemdderaypmtdhkalaarfpgdflfgvatasfqiega
tkvdgrkpsiwdafcnmpghvfgrhngdvacdhynrweddldlikemgveayrfsiawpr
iipdgfgpinekgldfydrlvdgckargiktyatlyhwdlpltlmgdggwasrstahafq
ryaktvmarlgdrldavatfnspwcavwlshlygihapgernmeaalaamhhinlahgfg
veasrhvapkvpvglvlnahsvipasnsdadmkaaerafqfhngaffdpvfkgeypaemi
ealgsrmpvveaedlsiisqkldwwglnyytpmrvaddategaefpatkqapavsdvktd
igwevyapalhslvetlyeryelpdcyitengacynmgvengevddqprldyyaehlgiv
adlvkdgypmrgyfawslmdnfewaegyrmrfglvhvdyetqvrtlknsgkwysalasgf
pkgnhgvmkg

    Sequence, based on observed residues (ATOM records): (download) 
    >6rk2A (A:)
aypmtdhkalaarfpgdflfgvatasfqiegatkvdgrkpsiwdafcnmpghvfgrhngd
vacdhynrweddldlikemgveayrfsiawpriipdgfgpinekgldfydrlvdgckarg
iktyatlyhwdlpltlmgdggwasrstahafqryaktvmarlgdrldavatfnspwcavw
lshlygihapgernmeaalaamhhinlahgfgveasrhvapkvpvglvlnahsvipasns
dadmkaaerafqfhngaffdpvfkgeypaemiealgsrmpvveaedlsiisqkldwwgln
yytpmrvaddategaefpatkqapavsdvktdigwevyapalhslvetlyeryelpdcyi
tengacynmgvengevddqprldyyaehlgivadlvkdgypmrgyfawslmdnfewaegy
rmrfglvhvdyetqvrtlknsgkwysalasgfpk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6rk2B (B:)
mgsshhhhhhssglvprgshmlemdderaypmtdhkalaarfpgdflfgvatasfqiega
tkvdgrkpsiwdafcnmpghvfgrhngdvacdhynrweddldlikemgveayrfsiawpr
iipdgfgpinekgldfydrlvdgckargiktyatlyhwdlpltlmgdggwasrstahafq
ryaktvmarlgdrldavatfnspwcavwlshlygihapgernmeaalaamhhinlahgfg
veasrhvapkvpvglvlnahsvipasnsdadmkaaerafqfhngaffdpvfkgeypaemi
ealgsrmpvveaedlsiisqkldwwglnyytpmrvaddategaefpatkqapavsdvktd
igwevyapalhslvetlyeryelpdcyitengacynmgvengevddqprldyyaehlgiv
adlvkdgypmrgyfawslmdnfewaegyrmrfglvhvdyetqvrtlknsgkwysalasgf
pkgnhgvmkg

    Sequence, based on observed residues (ATOM records): (download) 
    >6rk2B (B:)
mtdhkalaarfpgdflfgvatasfqiegatkvdgrkpsiwdafcnmpghvfgrhngdvac
dhynrweddldlikemgveayrfsiawpriipdgfgpinekgldfydrlvdgckargikt
yatlyhwdlpltlmgdggwasrstahafqryaktvmarlgdrldavatfnspwcavwlsh
lygihapgernmeaalaamhhinlahgfgveasrhvapkvpvglvlnahsvipasnsdad
mkaaerafqfhngaffdpvfkgeypaemiealgsrmpvveaedlsiisqkldwwglnyyt
pmrvaddategaefpatkqapavsdvktdigwevyapalhslvetlyeryelpdcyiten
gacynmgvengevddqprldyyaehlgivadlvkdgypmrgyfawslmdnfewaegyrmr
fglvhvdyetqvrtlknsgkwysalasgfpk