PDB entry 6rjk

View 6rjk on RCSB PDB site
Description: Structure of virulence factor SghA from Agrobacterium tumefaciens
Class: hydrolase
Keywords: Chemical signaling, Sucrose, Agrobacterium, Host-pathogen interaction, Glucosidase, HYDROLASE
Deposited on 2019-04-27, released 2019-10-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-11-06, with a file datestamp of 2019-11-01.
Experiment type: XRAY
Resolution: 1.92 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-glucosidase
    Species: Agrobacterium tumefaciens A6 [TaxId:1453998]
    Gene: sghA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rjka_
  • Chain 'B':
    Compound: Beta-glucosidase
    Species: Agrobacterium tumefaciens A6 [TaxId:1453998]
    Gene: sghA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6rjkb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6rjkA (A:)
mgsshhhhhhssglvprgshmlemdderaypmtdhkalaarfpgdflfgvatasfqiega
tkvdgrkpsiwdafcnmpghvfgrhngdvacdhynrweddldlikemgveayrfsiawpr
iipdgfgpinekgldfydrlvdgckargiktyatlyhwdlpltlmgdggwasrstahafq
ryaktvmarlgdrldavatfnepwcavwlshlygihapgernmeaalaamhhinlahgfg
veasrhvapkvpvglvlnahsvipasnsdadmkaaerafqfhngaffdpvfkgeypaemi
ealgsrmpvveaedlsiisqkldwwglnyytpmrvaddategaefpatkqapavsdvktd
igwevyapalhslvetlyeryelpdcyitengacynmgvengevddqprldyyaehlgiv
adlvkdgypmrgyfawslmdnfewaegyrmrfglvhvdyetqvrtlknsgkwysalasgf
pkgnhgvmkg

    Sequence, based on observed residues (ATOM records): (download) 
    >6rjkA (A:)
aypmtdhkalaarfpgdflfgvatasfqiegatkvdgrkpsiwdafcnmpghvfgrhngd
vacdhynrweddldlikemgveayrfsiawpriipdgfgpinekgldfydrlvdgckarg
iktyatlyhwdlpltlmgdggwasrstahafqryaktvmarlgdrldavatfnepwcavw
lshlygihapgernmeaalaamhhinlahgfgveasrhvapkvpvglvlnahsvipasns
dadmkaaerafqfhngaffdpvfkgeypaemiealgsrmpvveaedlsiisqkldwwgln
yytpmrvaddategaefpatkqapavsdvktdigwevyapalhslvetlyeryelpdcyi
tengacynmgvengevddqprldyyaehlgivadlvkdgypmrgyfawslmdnfewaegy
rmrfglvhvdyetqvrtlknsgkwysalasgfpk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6rjkB (B:)
mgsshhhhhhssglvprgshmlemdderaypmtdhkalaarfpgdflfgvatasfqiega
tkvdgrkpsiwdafcnmpghvfgrhngdvacdhynrweddldlikemgveayrfsiawpr
iipdgfgpinekgldfydrlvdgckargiktyatlyhwdlpltlmgdggwasrstahafq
ryaktvmarlgdrldavatfnepwcavwlshlygihapgernmeaalaamhhinlahgfg
veasrhvapkvpvglvlnahsvipasnsdadmkaaerafqfhngaffdpvfkgeypaemi
ealgsrmpvveaedlsiisqkldwwglnyytpmrvaddategaefpatkqapavsdvktd
igwevyapalhslvetlyeryelpdcyitengacynmgvengevddqprldyyaehlgiv
adlvkdgypmrgyfawslmdnfewaegyrmrfglvhvdyetqvrtlknsgkwysalasgf
pkgnhgvmkg

    Sequence, based on observed residues (ATOM records): (download) 
    >6rjkB (B:)
dhkalaarfpgdflfgvatasfqiegatkvdgrkpsiwdafcnmpghvfgrhngdvacdh
ynrweddldlikemgveayrfsiawpriipdgfgpinekgldfydrlvdgckargiktya
tlyhwdlpltlmgdggwasrstahafqryaktvmarlgdrldavatfnepwcavwlshly
gihapgernmeaalaamhhinlahgfgveasrhvapkvpvglvlnahsvipasnsdadmk
aaerafqfhngaffdpvfkgeypaemiealgsrmpvveaedlsiisqkldwwglnyytpm
rvaddategaefpatkqapavsdvktdigwevyapalhslvetlyeryelpdcyitenga
cynmgvengevddqprldyyaehlgivadlvkdgypmrgyfawslmdnfewaegyrmrfg
lvhvdyetqvrtlknsgkwysalasgfpk